Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.77■■□□□ 1.4
CDH23Q9H251 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.77■■□□□ 1.4
CDH23Q9H251 HLA-L-211ENST00000482052 1765 ntBASIC23.77■■□□□ 1.4
CDH23Q9H251 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDH23Q9H251 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.77■■□□□ 1.4
CDH23Q9H251 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDH23Q9H251 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDH23Q9H251 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDH23Q9H251 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDH23Q9H251 SPI1-203ENST00000533030 661 ntTSL 2 BASIC23.76■■□□□ 1.39
CDH23Q9H251 UBE2DNL-204ENST00000602536 740 ntBASIC23.76■■□□□ 1.39
CDH23Q9H251 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.76■■□□□ 1.39
CDH23Q9H251 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDH23Q9H251 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
CDH23Q9H251 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDH23Q9H251 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDH23Q9H251 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDH23Q9H251 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH23Q9H251 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC23.75■■□□□ 1.39
CDH23Q9H251 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.75■■□□□ 1.39
CDH23Q9H251 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH23Q9H251 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.75■■□□□ 1.39
CDH23Q9H251 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH23Q9H251 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH23Q9H251 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH23Q9H251 GCSHP5-201ENST00000443090 522 ntBASIC23.75■■□□□ 1.39
CDH23Q9H251 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
CDH23Q9H251 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC23.75■■□□□ 1.39
CDH23Q9H251 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CDH23Q9H251 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CDH23Q9H251 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.75■■□□□ 1.39
CDH23Q9H251 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CDH23Q9H251 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH23Q9H251 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDH23Q9H251 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.75■■□□□ 1.39
CDH23Q9H251 DUSP5P2-201ENST00000426873 1033 ntBASIC23.75■■□□□ 1.39
CDH23Q9H251 CNN2P6-201ENST00000439038 900 ntBASIC23.75■■□□□ 1.39
CDH23Q9H251 DUX4L16-201ENST00000555130 1264 ntBASIC23.75■■□□□ 1.39
CDH23Q9H251 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC23.75■■□□□ 1.39
CDH23Q9H251 AC141586.4-201ENST00000624558 1573 ntBASIC23.75■■□□□ 1.39
CDH23Q9H251 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC23.74■■□□□ 1.39
CDH23Q9H251 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDH23Q9H251 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDH23Q9H251 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDH23Q9H251 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CDH23Q9H251 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.74■■□□□ 1.39
CDH23Q9H251 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDH23Q9H251 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDH23Q9H251 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDH23Q9H251 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CDH23Q9H251 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
CDH23Q9H251 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.73■■□□□ 1.39
CDH23Q9H251 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDH23Q9H251 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CDH23Q9H251 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDH23Q9H251 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDH23Q9H251 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDH23Q9H251 AC005181.1-201ENST00000604782 1256 ntBASIC23.73■■□□□ 1.39
CDH23Q9H251 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CDH23Q9H251 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CDH23Q9H251 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
CDH23Q9H251 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDH23Q9H251 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.73■■□□□ 1.39
CDH23Q9H251 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.73■■□□□ 1.39
CDH23Q9H251 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDH23Q9H251 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
CDH23Q9H251 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.72■■□□□ 1.39
CDH23Q9H251 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC23.72■■□□□ 1.39
CDH23Q9H251 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CDH23Q9H251 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CDH23Q9H251 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDH23Q9H251 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.72■■□□□ 1.39
CDH23Q9H251 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
CDH23Q9H251 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CDH23Q9H251 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CDH23Q9H251 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CDH23Q9H251 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH23Q9H251 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.71■■□□□ 1.39
CDH23Q9H251 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH23Q9H251 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.71■■□□□ 1.39
CDH23Q9H251 AL121832.2-201ENST00000610979 668 ntBASIC23.71■■□□□ 1.39
CDH23Q9H251 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDH23Q9H251 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
CDH23Q9H251 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CDH23Q9H251 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.71■■□□□ 1.39
CDH23Q9H251 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CDH23Q9H251 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CDH23Q9H251 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.7■■□□□ 1.39
CDH23Q9H251 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
CDH23Q9H251 KRT18P29-201ENST00000397031 1267 ntBASIC23.7■■□□□ 1.38
CDH23Q9H251 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
CDH23Q9H251 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CDH23Q9H251 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.69■■□□□ 1.38
CDH23Q9H251 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDH23Q9H251 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDH23Q9H251 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.69■■□□□ 1.38
CDH23Q9H251 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
CDH23Q9H251 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.69■■□□□ 1.38
CDH23Q9H251 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CDH23Q9H251 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms