Protein–RNA interactions for Protein: Q9BZJ0

CRNKL1, Crooked neck-like protein 1, humanhuman

Known RBP Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1Q9BZJ0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
CRNKL1Q9BZJ0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.33■■□□□ 1.81
CRNKL1Q9BZJ0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.33■■□□□ 1.81
CRNKL1Q9BZJ0 MIR6821-201ENST00000617625 74 ntBASIC26.33■■□□□ 1.81
CRNKL1Q9BZJ0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.33■■□□□ 1.81
CRNKL1Q9BZJ0 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CRNKL1Q9BZJ0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRNKL1Q9BZJ0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRNKL1Q9BZJ0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.32■■□□□ 1.8
CRNKL1Q9BZJ0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRNKL1Q9BZJ0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRNKL1Q9BZJ0 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.32■■□□□ 1.8
CRNKL1Q9BZJ0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CRNKL1Q9BZJ0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.32■■□□□ 1.8
CRNKL1Q9BZJ0 AC097381.1-201ENST00000429019 1296 ntBASIC26.32■■□□□ 1.8
CRNKL1Q9BZJ0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CRNKL1Q9BZJ0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.32■■□□□ 1.8
CRNKL1Q9BZJ0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CRNKL1Q9BZJ0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.32■■□□□ 1.8
CRNKL1Q9BZJ0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CRNKL1Q9BZJ0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.31■■□□□ 1.8
CRNKL1Q9BZJ0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CRNKL1Q9BZJ0 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CRNKL1Q9BZJ0 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CRNKL1Q9BZJ0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CRNKL1Q9BZJ0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CRNKL1Q9BZJ0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CRNKL1Q9BZJ0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CRNKL1Q9BZJ0 AL358852.1-201ENST00000623174 1268 ntBASIC26.31■■□□□ 1.8
CRNKL1Q9BZJ0 AC068587.7-201ENST00000641602 218 ntBASIC26.31■■□□□ 1.8
CRNKL1Q9BZJ0 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CRNKL1Q9BZJ0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.31■■□□□ 1.8
CRNKL1Q9BZJ0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CRNKL1Q9BZJ0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
CRNKL1Q9BZJ0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.3■■□□□ 1.8
CRNKL1Q9BZJ0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CRNKL1Q9BZJ0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
CRNKL1Q9BZJ0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CRNKL1Q9BZJ0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC26.3■■□□□ 1.8
CRNKL1Q9BZJ0 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.3■■□□□ 1.8
CRNKL1Q9BZJ0 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CRNKL1Q9BZJ0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CRNKL1Q9BZJ0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CRNKL1Q9BZJ0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.29■■□□□ 1.8
CRNKL1Q9BZJ0 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CRNKL1Q9BZJ0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
CRNKL1Q9BZJ0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CRNKL1Q9BZJ0 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CRNKL1Q9BZJ0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.29■■□□□ 1.8
CRNKL1Q9BZJ0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.29■■□□□ 1.8
CRNKL1Q9BZJ0 AC012414.1-201ENST00000556676 535 ntBASIC26.29■■□□□ 1.8
CRNKL1Q9BZJ0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.29■■□□□ 1.8
CRNKL1Q9BZJ0 MIR5787-201ENST00000611784 55 ntBASIC26.29■■□□□ 1.8
CRNKL1Q9BZJ0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.29■■□□□ 1.8
CRNKL1Q9BZJ0 AL031602.1-201ENST00000633169 911 ntBASIC26.29■■□□□ 1.8
CRNKL1Q9BZJ0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.29■■□□□ 1.8
CRNKL1Q9BZJ0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CRNKL1Q9BZJ0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.29■■□□□ 1.8
CRNKL1Q9BZJ0 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CRNKL1Q9BZJ0 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
CRNKL1Q9BZJ0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CRNKL1Q9BZJ0 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC26.28■■□□□ 1.8
CRNKL1Q9BZJ0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC26.28■■□□□ 1.8
CRNKL1Q9BZJ0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CRNKL1Q9BZJ0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC26.27■■□□□ 1.8
CRNKL1Q9BZJ0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC26.27■■□□□ 1.8
CRNKL1Q9BZJ0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CRNKL1Q9BZJ0 AL354811.1-201ENST00000610286 706 ntBASIC26.27■■□□□ 1.8
CRNKL1Q9BZJ0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CRNKL1Q9BZJ0 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC26.27■■□□□ 1.8
CRNKL1Q9BZJ0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CRNKL1Q9BZJ0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
CRNKL1Q9BZJ0 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CRNKL1Q9BZJ0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CRNKL1Q9BZJ0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
CRNKL1Q9BZJ0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CRNKL1Q9BZJ0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CRNKL1Q9BZJ0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CRNKL1Q9BZJ0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CRNKL1Q9BZJ0 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
CRNKL1Q9BZJ0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC26.26■■□□□ 1.79
CRNKL1Q9BZJ0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CRNKL1Q9BZJ0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.26■■□□□ 1.79
CRNKL1Q9BZJ0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC26.26■■□□□ 1.79
CRNKL1Q9BZJ0 AC087623.3-201ENST00000607047 1098 ntBASIC26.26■■□□□ 1.79
CRNKL1Q9BZJ0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
CRNKL1Q9BZJ0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CRNKL1Q9BZJ0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CRNKL1Q9BZJ0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CRNKL1Q9BZJ0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
CRNKL1Q9BZJ0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRNKL1Q9BZJ0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.25■■□□□ 1.79
CRNKL1Q9BZJ0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRNKL1Q9BZJ0 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
CRNKL1Q9BZJ0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRNKL1Q9BZJ0 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CRNKL1Q9BZJ0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.25■■□□□ 1.79
CRNKL1Q9BZJ0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.25■■□□□ 1.79
CRNKL1Q9BZJ0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.25■■□□□ 1.79
CRNKL1Q9BZJ0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms