Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDHD3Q9BSH5 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
HDHD3Q9BSH5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.61■□□□□ 0.57
HDHD3Q9BSH5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDHD3Q9BSH5 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDHD3Q9BSH5 FBXW4P1-201ENST00000426721 2239 ntBASIC18.61■□□□□ 0.57
HDHD3Q9BSH5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDHD3Q9BSH5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDHD3Q9BSH5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDHD3Q9BSH5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.6■□□□□ 0.57
HDHD3Q9BSH5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.6■□□□□ 0.57
HDHD3Q9BSH5 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.6■□□□□ 0.57
HDHD3Q9BSH5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HDHD3Q9BSH5 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HDHD3Q9BSH5 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDHD3Q9BSH5 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDHD3Q9BSH5 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.59■□□□□ 0.57
HDHD3Q9BSH5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HDHD3Q9BSH5 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.59■□□□□ 0.57
HDHD3Q9BSH5 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
HDHD3Q9BSH5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HDHD3Q9BSH5 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.59■□□□□ 0.57
HDHD3Q9BSH5 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.59■□□□□ 0.57
HDHD3Q9BSH5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDHD3Q9BSH5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.59■□□□□ 0.57
HDHD3Q9BSH5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDHD3Q9BSH5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HDHD3Q9BSH5 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.59■□□□□ 0.57
HDHD3Q9BSH5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDHD3Q9BSH5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.59■□□□□ 0.57
HDHD3Q9BSH5 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HDHD3Q9BSH5 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
HDHD3Q9BSH5 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
HDHD3Q9BSH5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
HDHD3Q9BSH5 YBX1P4-201ENST00000392794 808 ntBASIC18.58■□□□□ 0.56
HDHD3Q9BSH5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.58■□□□□ 0.56
HDHD3Q9BSH5 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HDHD3Q9BSH5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
HDHD3Q9BSH5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.58■□□□□ 0.56
HDHD3Q9BSH5 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
HDHD3Q9BSH5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
HDHD3Q9BSH5 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
HDHD3Q9BSH5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HDHD3Q9BSH5 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HDHD3Q9BSH5 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HDHD3Q9BSH5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HDHD3Q9BSH5 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HDHD3Q9BSH5 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.57■□□□□ 0.56
HDHD3Q9BSH5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HDHD3Q9BSH5 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
HDHD3Q9BSH5 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC18.57■□□□□ 0.56
HDHD3Q9BSH5 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HDHD3Q9BSH5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.57■□□□□ 0.56
HDHD3Q9BSH5 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HDHD3Q9BSH5 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HDHD3Q9BSH5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HDHD3Q9BSH5 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
HDHD3Q9BSH5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDHD3Q9BSH5 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDHD3Q9BSH5 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HDHD3Q9BSH5 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HDHD3Q9BSH5 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.56■□□□□ 0.56
HDHD3Q9BSH5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDHD3Q9BSH5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDHD3Q9BSH5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HDHD3Q9BSH5 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.56■□□□□ 0.56
HDHD3Q9BSH5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.56■□□□□ 0.56
HDHD3Q9BSH5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.56■□□□□ 0.56
HDHD3Q9BSH5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.56■□□□□ 0.56
HDHD3Q9BSH5 AC137630.3-201ENST00000607245 391 ntBASIC18.56■□□□□ 0.56
HDHD3Q9BSH5 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDHD3Q9BSH5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HDHD3Q9BSH5 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDHD3Q9BSH5 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDHD3Q9BSH5 LINC01529-204ENST00000636474 1715 ntBASIC18.55■□□□□ 0.56
HDHD3Q9BSH5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDHD3Q9BSH5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDHD3Q9BSH5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDHD3Q9BSH5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDHD3Q9BSH5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.55■□□□□ 0.56
HDHD3Q9BSH5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.55■□□□□ 0.56
HDHD3Q9BSH5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDHD3Q9BSH5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.55■□□□□ 0.56
HDHD3Q9BSH5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.55■□□□□ 0.56
HDHD3Q9BSH5 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDHD3Q9BSH5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDHD3Q9BSH5 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
HDHD3Q9BSH5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDHD3Q9BSH5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.54■□□□□ 0.56
HDHD3Q9BSH5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDHD3Q9BSH5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDHD3Q9BSH5 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.54■□□□□ 0.56
HDHD3Q9BSH5 AL031848.2-201ENST00000607670 837 ntBASIC18.54■□□□□ 0.56
HDHD3Q9BSH5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.54■□□□□ 0.56
HDHD3Q9BSH5 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.54■□□□□ 0.56
HDHD3Q9BSH5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDHD3Q9BSH5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.54■□□□□ 0.56
HDHD3Q9BSH5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDHD3Q9BSH5 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.54■□□□□ 0.56
HDHD3Q9BSH5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms