Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.72■□□□□ 0.91
TUBA1CQ9BQE3 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.72■□□□□ 0.91
TUBA1CQ9BQE3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.72■□□□□ 0.91
TUBA1CQ9BQE3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.72■□□□□ 0.91
TUBA1CQ9BQE3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.72■□□□□ 0.91
TUBA1CQ9BQE3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.72■□□□□ 0.91
TUBA1CQ9BQE3 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.72■□□□□ 0.91
TUBA1CQ9BQE3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TUBA1CQ9BQE3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TUBA1CQ9BQE3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
TUBA1CQ9BQE3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TUBA1CQ9BQE3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
TUBA1CQ9BQE3 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.72■□□□□ 0.91
TUBA1CQ9BQE3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TUBA1CQ9BQE3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TUBA1CQ9BQE3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TUBA1CQ9BQE3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.71■□□□□ 0.91
TUBA1CQ9BQE3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TUBA1CQ9BQE3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.71■□□□□ 0.91
TUBA1CQ9BQE3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.71■□□□□ 0.91
TUBA1CQ9BQE3 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.71■□□□□ 0.91
TUBA1CQ9BQE3 MIR3621-201ENST00000580529 85 ntBASIC20.71■□□□□ 0.91
TUBA1CQ9BQE3 MIR6722-201ENST00000617286 78 ntBASIC20.71■□□□□ 0.91
TUBA1CQ9BQE3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TUBA1CQ9BQE3 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.71■□□□□ 0.91
TUBA1CQ9BQE3 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.7■□□□□ 0.91
TUBA1CQ9BQE3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TUBA1CQ9BQE3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TUBA1CQ9BQE3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.7■□□□□ 0.9
TUBA1CQ9BQE3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.7■□□□□ 0.9
TUBA1CQ9BQE3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.7■□□□□ 0.9
TUBA1CQ9BQE3 AC004448.1-201ENST00000458332 883 ntBASIC20.7■□□□□ 0.9
TUBA1CQ9BQE3 AL356740.2-201ENST00000601559 647 ntBASIC20.7■□□□□ 0.9
TUBA1CQ9BQE3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TUBA1CQ9BQE3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TUBA1CQ9BQE3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TUBA1CQ9BQE3 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.7■□□□□ 0.9
TUBA1CQ9BQE3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TUBA1CQ9BQE3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TUBA1CQ9BQE3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TUBA1CQ9BQE3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TUBA1CQ9BQE3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC20.69■□□□□ 0.9
TUBA1CQ9BQE3 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
TUBA1CQ9BQE3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.69■□□□□ 0.9
TUBA1CQ9BQE3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TUBA1CQ9BQE3 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.69■□□□□ 0.9
TUBA1CQ9BQE3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.69■□□□□ 0.9
TUBA1CQ9BQE3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.69■□□□□ 0.9
TUBA1CQ9BQE3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TUBA1CQ9BQE3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.69■□□□□ 0.9
TUBA1CQ9BQE3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TUBA1CQ9BQE3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.69■□□□□ 0.9
TUBA1CQ9BQE3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 AC131281.2-201ENST00000520478 145 ntBASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TUBA1CQ9BQE3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBA1CQ9BQE3 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
TUBA1CQ9BQE3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBA1CQ9BQE3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBA1CQ9BQE3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBA1CQ9BQE3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBA1CQ9BQE3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBA1CQ9BQE3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.67■□□□□ 0.9
TUBA1CQ9BQE3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.67■□□□□ 0.9
TUBA1CQ9BQE3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBA1CQ9BQE3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TUBA1CQ9BQE3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TUBA1CQ9BQE3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
TUBA1CQ9BQE3 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
TUBA1CQ9BQE3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBA1CQ9BQE3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TUBA1CQ9BQE3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.66■□□□□ 0.9
TUBA1CQ9BQE3 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBA1CQ9BQE3 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBA1CQ9BQE3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBA1CQ9BQE3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.66■□□□□ 0.9
TUBA1CQ9BQE3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
TUBA1CQ9BQE3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
TUBA1CQ9BQE3 AC131274.2-201ENST00000580697 1507 ntBASIC20.66■□□□□ 0.9
TUBA1CQ9BQE3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.66■□□□□ 0.9
TUBA1CQ9BQE3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.66■□□□□ 0.9
TUBA1CQ9BQE3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.66■□□□□ 0.9
TUBA1CQ9BQE3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TUBA1CQ9BQE3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TUBA1CQ9BQE3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TUBA1CQ9BQE3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms