Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CPNE1Q99829 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CPNE1Q99829 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.07■■□□□ 1.12
CPNE1Q99829 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CPNE1Q99829 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CPNE1Q99829 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.07■■□□□ 1.12
CPNE1Q99829 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE1Q99829 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.06■■□□□ 1.12
CPNE1Q99829 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE1Q99829 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CPNE1Q99829 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.06■■□□□ 1.12
CPNE1Q99829 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE1Q99829 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
CPNE1Q99829 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE1Q99829 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE1Q99829 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.06■■□□□ 1.12
CPNE1Q99829 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.06■■□□□ 1.12
CPNE1Q99829 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.06■■□□□ 1.12
CPNE1Q99829 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC22.06■■□□□ 1.12
CPNE1Q99829 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE1Q99829 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CPNE1Q99829 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CPNE1Q99829 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
CPNE1Q99829 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CPNE1Q99829 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CPNE1Q99829 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
CPNE1Q99829 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CPNE1Q99829 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
CPNE1Q99829 KRT125P-201ENST00000546827 989 ntBASIC22.05■■□□□ 1.12
CPNE1Q99829 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPNE1Q99829 Z92544.1-202ENST00000571933 1220 ntBASIC22.05■■□□□ 1.12
CPNE1Q99829 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.05■■□□□ 1.12
CPNE1Q99829 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
CPNE1Q99829 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE1Q99829 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE1Q99829 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE1Q99829 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE1Q99829 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.04■■□□□ 1.12
CPNE1Q99829 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
CPNE1Q99829 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
CPNE1Q99829 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE1Q99829 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CPNE1Q99829 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
CPNE1Q99829 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE1Q99829 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE1Q99829 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE1Q99829 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CPNE1Q99829 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
CPNE1Q99829 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE1Q99829 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE1Q99829 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE1Q99829 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE1Q99829 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE1Q99829 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC22.03■■□□□ 1.12
CPNE1Q99829 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
CPNE1Q99829 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE1Q99829 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE1Q99829 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE1Q99829 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE1Q99829 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CPNE1Q99829 LINC01960-201ENST00000563759 1884 ntBASIC22.03■■□□□ 1.12
CPNE1Q99829 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CPNE1Q99829 AC009102.2-201ENST00000606772 1639 ntBASIC22.02■■□□□ 1.12
CPNE1Q99829 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.02■■□□□ 1.12
CPNE1Q99829 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.02■■□□□ 1.12
CPNE1Q99829 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.02■■□□□ 1.12
CPNE1Q99829 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.02■■□□□ 1.12
CPNE1Q99829 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CPNE1Q99829 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CPNE1Q99829 MTDHP2-201ENST00000601468 714 ntBASIC22.02■■□□□ 1.12
CPNE1Q99829 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CPNE1Q99829 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CPNE1Q99829 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE1Q99829 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE1Q99829 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.01■■□□□ 1.11
CPNE1Q99829 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.01■■□□□ 1.11
CPNE1Q99829 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE1Q99829 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE1Q99829 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CPNE1Q99829 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE1Q99829 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.01■■□□□ 1.11
CPNE1Q99829 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.01■■□□□ 1.11
CPNE1Q99829 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE1Q99829 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
CPNE1Q99829 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CPNE1Q99829 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPNE1Q99829 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22■■□□□ 1.11
CPNE1Q99829 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CPNE1Q99829 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22■■□□□ 1.11
CPNE1Q99829 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22■■□□□ 1.11
CPNE1Q99829 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22■■□□□ 1.11
CPNE1Q99829 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22■■□□□ 1.11
CPNE1Q99829 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CPNE1Q99829 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22■■□□□ 1.11
CPNE1Q99829 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.99■■□□□ 1.11
CPNE1Q99829 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.99■■□□□ 1.11
CPNE1Q99829 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CPNE1Q99829 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CPNE1Q99829 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.99■■□□□ 1.11
CPNE1Q99829 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms