Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
NPAS1Q99742 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NPAS1Q99742 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.1■□□□□ 0.81
NPAS1Q99742 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.1■□□□□ 0.81
NPAS1Q99742 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPAS1Q99742 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.1■□□□□ 0.81
NPAS1Q99742 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPAS1Q99742 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.1■□□□□ 0.81
NPAS1Q99742 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS1Q99742 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.09■□□□□ 0.81
NPAS1Q99742 AC133637.1-201ENST00000624115 1537 ntBASIC20.09■□□□□ 0.81
NPAS1Q99742 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS1Q99742 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NPAS1Q99742 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.09■□□□□ 0.81
NPAS1Q99742 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS1Q99742 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
NPAS1Q99742 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
NPAS1Q99742 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS1Q99742 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS1Q99742 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NPAS1Q99742 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS1Q99742 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.08■□□□□ 0.81
NPAS1Q99742 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS1Q99742 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS1Q99742 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS1Q99742 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.08■□□□□ 0.81
NPAS1Q99742 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
NPAS1Q99742 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS1Q99742 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
NPAS1Q99742 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS1Q99742 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS1Q99742 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS1Q99742 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS1Q99742 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS1Q99742 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS1Q99742 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.08■□□□□ 0.81
NPAS1Q99742 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.08■□□□□ 0.81
NPAS1Q99742 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPAS1Q99742 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NPAS1Q99742 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.08■□□□□ 0.81
NPAS1Q99742 AC092171.4-201ENST00000609130 632 ntBASIC20.08■□□□□ 0.81
NPAS1Q99742 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
NPAS1Q99742 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
NPAS1Q99742 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPAS1Q99742 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
NPAS1Q99742 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS1Q99742 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
NPAS1Q99742 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS1Q99742 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS1Q99742 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS1Q99742 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS1Q99742 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS1Q99742 PBX2P1-201ENST00000493219 1291 ntBASIC20.07■□□□□ 0.8
NPAS1Q99742 DUX4L19-201ENST00000557448 1267 ntBASIC20.07■□□□□ 0.8
NPAS1Q99742 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPAS1Q99742 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.07■□□□□ 0.8
NPAS1Q99742 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.07■□□□□ 0.8
NPAS1Q99742 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPAS1Q99742 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NPAS1Q99742 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPAS1Q99742 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.06■□□□□ 0.8
NPAS1Q99742 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.06■□□□□ 0.8
NPAS1Q99742 MIR4767-201ENST00000582827 78 ntBASIC20.06■□□□□ 0.8
NPAS1Q99742 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.06■□□□□ 0.8
NPAS1Q99742 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPAS1Q99742 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPAS1Q99742 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPAS1Q99742 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.06■□□□□ 0.8
NPAS1Q99742 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPAS1Q99742 AC135279.3-201ENST00000610945 1311 ntBASIC20.05■□□□□ 0.8
NPAS1Q99742 C1orf229-201ENST00000623686 2258 ntBASIC20.05■□□□□ 0.8
NPAS1Q99742 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.05■□□□□ 0.8
NPAS1Q99742 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NPAS1Q99742 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.05■□□□□ 0.8
NPAS1Q99742 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPAS1Q99742 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.05■□□□□ 0.8
NPAS1Q99742 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NPAS1Q99742 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.05■□□□□ 0.8
NPAS1Q99742 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPAS1Q99742 AL139246.5-201ENST00000606645 996 ntBASIC20.05■□□□□ 0.8
NPAS1Q99742 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NPAS1Q99742 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NPAS1Q99742 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.04■□□□□ 0.8
NPAS1Q99742 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NPAS1Q99742 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.04■□□□□ 0.8
NPAS1Q99742 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPAS1Q99742 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NPAS1Q99742 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.04■□□□□ 0.8
NPAS1Q99742 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.04■□□□□ 0.8
NPAS1Q99742 AC106739.1-201ENST00000617035 715 ntBASIC20.04■□□□□ 0.8
NPAS1Q99742 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPAS1Q99742 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.04■□□□□ 0.8
NPAS1Q99742 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.03■□□□□ 0.8
NPAS1Q99742 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS1Q99742 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.03■□□□□ 0.8
NPAS1Q99742 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS1Q99742 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NPAS1Q99742 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPAS1Q99742 AC068473.5-201ENST00000616428 2072 ntBASIC20.03■□□□□ 0.8
NPAS1Q99742 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms