Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
BARD1Q99728 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BARD1Q99728 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BARD1Q99728 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BARD1Q99728 AC004448.1-201ENST00000458332 883 ntBASIC21.01■□□□□ 0.95
BARD1Q99728 DUX4L19-201ENST00000557448 1267 ntBASIC21.01■□□□□ 0.95
BARD1Q99728 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
BARD1Q99728 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BARD1Q99728 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.01■□□□□ 0.95
BARD1Q99728 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.01■□□□□ 0.95
BARD1Q99728 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
BARD1Q99728 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21■□□□□ 0.95
BARD1Q99728 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BARD1Q99728 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
BARD1Q99728 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BARD1Q99728 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21■□□□□ 0.95
BARD1Q99728 MIR939-201ENST00000401314 82 ntBASIC21■□□□□ 0.95
BARD1Q99728 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21■□□□□ 0.95
BARD1Q99728 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21■□□□□ 0.95
BARD1Q99728 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21■□□□□ 0.95
BARD1Q99728 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
BARD1Q99728 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
BARD1Q99728 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21■□□□□ 0.95
BARD1Q99728 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21■□□□□ 0.95
BARD1Q99728 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
BARD1Q99728 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
BARD1Q99728 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
BARD1Q99728 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BARD1Q99728 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BARD1Q99728 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
BARD1Q99728 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
BARD1Q99728 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
BARD1Q99728 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
BARD1Q99728 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BARD1Q99728 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
BARD1Q99728 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
BARD1Q99728 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
BARD1Q99728 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.99■□□□□ 0.95
BARD1Q99728 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.99■□□□□ 0.95
BARD1Q99728 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
BARD1Q99728 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BARD1Q99728 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.98■□□□□ 0.95
BARD1Q99728 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BARD1Q99728 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.98■□□□□ 0.95
BARD1Q99728 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.98■□□□□ 0.95
BARD1Q99728 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
BARD1Q99728 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BARD1Q99728 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BARD1Q99728 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.98■□□□□ 0.95
BARD1Q99728 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.98■□□□□ 0.95
BARD1Q99728 AC105265.2-201ENST00000467189 838 ntBASIC20.98■□□□□ 0.95
BARD1Q99728 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.98■□□□□ 0.95
BARD1Q99728 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.98■□□□□ 0.95
BARD1Q99728 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
BARD1Q99728 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BARD1Q99728 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
BARD1Q99728 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
BARD1Q99728 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.97■□□□□ 0.95
BARD1Q99728 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BARD1Q99728 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
BARD1Q99728 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BARD1Q99728 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
BARD1Q99728 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
BARD1Q99728 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BARD1Q99728 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BARD1Q99728 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BARD1Q99728 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.97■□□□□ 0.95
BARD1Q99728 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.97■□□□□ 0.95
BARD1Q99728 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.97■□□□□ 0.95
BARD1Q99728 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
BARD1Q99728 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BARD1Q99728 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
BARD1Q99728 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BARD1Q99728 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.96■□□□□ 0.95
BARD1Q99728 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
BARD1Q99728 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.96■□□□□ 0.95
BARD1Q99728 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BARD1Q99728 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BARD1Q99728 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BARD1Q99728 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
BARD1Q99728 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.96■□□□□ 0.95
BARD1Q99728 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BARD1Q99728 AF213884.3-201ENST00000563833 479 ntBASIC20.96■□□□□ 0.95
BARD1Q99728 MIR6821-201ENST00000617625 74 ntBASIC20.96■□□□□ 0.95
BARD1Q99728 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.96■□□□□ 0.95
BARD1Q99728 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
BARD1Q99728 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
BARD1Q99728 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BARD1Q99728 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
BARD1Q99728 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.95■□□□□ 0.95
BARD1Q99728 ECEL1P1-201ENST00000373592 1742 ntBASIC20.95■□□□□ 0.94
BARD1Q99728 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
BARD1Q99728 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
BARD1Q99728 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
BARD1Q99728 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.95■□□□□ 0.94
BARD1Q99728 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
BARD1Q99728 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
BARD1Q99728 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
BARD1Q99728 AP001330.3-201ENST00000520123 633 ntBASIC20.95■□□□□ 0.94
BARD1Q99728 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms