Protein–RNA interactions for Protein: Q96PU5

NEDD4L, E3 ubiquitin-protein ligase NEDD4-like, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4LQ96PU5 AC005229.4-201ENST00000610085 2198 ntBASIC19.44■□□□□ 0.7
NEDD4LQ96PU5 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NEDD4LQ96PU5 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
NEDD4LQ96PU5 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
NEDD4LQ96PU5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4LQ96PU5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4LQ96PU5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4LQ96PU5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4LQ96PU5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4LQ96PU5 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NEDD4LQ96PU5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4LQ96PU5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.43■□□□□ 0.7
NEDD4LQ96PU5 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4LQ96PU5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NEDD4LQ96PU5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4LQ96PU5 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
NEDD4LQ96PU5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
NEDD4LQ96PU5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4LQ96PU5 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4LQ96PU5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4LQ96PU5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4LQ96PU5 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4LQ96PU5 AC087393.1-201ENST00000582896 145 ntBASIC19.42■□□□□ 0.7
NEDD4LQ96PU5 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.42■□□□□ 0.7
NEDD4LQ96PU5 MIR6765-201ENST00000614092 87 ntBASIC19.42■□□□□ 0.7
NEDD4LQ96PU5 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NEDD4LQ96PU5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.42■□□□□ 0.7
NEDD4LQ96PU5 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
NEDD4LQ96PU5 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NEDD4LQ96PU5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
NEDD4LQ96PU5 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
NEDD4LQ96PU5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
NEDD4LQ96PU5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
NEDD4LQ96PU5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.39■□□□□ 0.7
NEDD4LQ96PU5 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
NEDD4LQ96PU5 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NEDD4LQ96PU5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
NEDD4LQ96PU5 SPCS2P3-201ENST00000500401 656 ntBASIC19.39■□□□□ 0.69
NEDD4LQ96PU5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEDD4LQ96PU5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
NEDD4LQ96PU5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEDD4LQ96PU5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEDD4LQ96PU5 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NEDD4LQ96PU5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEDD4LQ96PU5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEDD4LQ96PU5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEDD4LQ96PU5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NEDD4LQ96PU5 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NEDD4LQ96PU5 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.38■□□□□ 0.69
NEDD4LQ96PU5 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NEDD4LQ96PU5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.38■□□□□ 0.69
NEDD4LQ96PU5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NEDD4LQ96PU5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEDD4LQ96PU5 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEDD4LQ96PU5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.37■□□□□ 0.69
NEDD4LQ96PU5 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEDD4LQ96PU5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEDD4LQ96PU5 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEDD4LQ96PU5 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.37■□□□□ 0.69
NEDD4LQ96PU5 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEDD4LQ96PU5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NEDD4LQ96PU5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms