Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CASD1Q96PB1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CASD1Q96PB1 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CASD1Q96PB1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CASD1Q96PB1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.82■■□□□ 1.4
CASD1Q96PB1 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.82■■□□□ 1.4
CASD1Q96PB1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.82■■□□□ 1.4
CASD1Q96PB1 TPRG1LP1-201ENST00000598702 760 ntBASIC23.82■■□□□ 1.4
CASD1Q96PB1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.82■■□□□ 1.4
CASD1Q96PB1 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CASD1Q96PB1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.82■■□□□ 1.4
CASD1Q96PB1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CASD1Q96PB1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.82■■□□□ 1.4
CASD1Q96PB1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CASD1Q96PB1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CASD1Q96PB1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.81■■□□□ 1.4
CASD1Q96PB1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CASD1Q96PB1 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CASD1Q96PB1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC23.81■■□□□ 1.4
CASD1Q96PB1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
CASD1Q96PB1 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.81■■□□□ 1.4
CASD1Q96PB1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CASD1Q96PB1 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CASD1Q96PB1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
CASD1Q96PB1 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CASD1Q96PB1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CASD1Q96PB1 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CASD1Q96PB1 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CASD1Q96PB1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC23.8■■□□□ 1.4
CASD1Q96PB1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.8■■□□□ 1.4
CASD1Q96PB1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC23.8■■□□□ 1.4
CASD1Q96PB1 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CASD1Q96PB1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASD1Q96PB1 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CASD1Q96PB1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASD1Q96PB1 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.79■■□□□ 1.4
CASD1Q96PB1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.79■■□□□ 1.4
CASD1Q96PB1 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASD1Q96PB1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CASD1Q96PB1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASD1Q96PB1 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASD1Q96PB1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASD1Q96PB1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASD1Q96PB1 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASD1Q96PB1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASD1Q96PB1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.79■■□□□ 1.4
CASD1Q96PB1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.79■■□□□ 1.4
CASD1Q96PB1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASD1Q96PB1 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.79■■□□□ 1.4
CASD1Q96PB1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CASD1Q96PB1 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.79■■□□□ 1.4
CASD1Q96PB1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CASD1Q96PB1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.79■■□□□ 1.4
CASD1Q96PB1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CASD1Q96PB1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CASD1Q96PB1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.78■■□□□ 1.4
CASD1Q96PB1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC23.78■■□□□ 1.4
CASD1Q96PB1 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.78■■□□□ 1.4
CASD1Q96PB1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.78■■□□□ 1.4
CASD1Q96PB1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CASD1Q96PB1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CASD1Q96PB1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CASD1Q96PB1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CASD1Q96PB1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CASD1Q96PB1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.78■■□□□ 1.4
CASD1Q96PB1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CASD1Q96PB1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CASD1Q96PB1 AL139125.2-201ENST00000623134 1869 ntBASIC23.77■■□□□ 1.4
CASD1Q96PB1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.77■■□□□ 1.4
CASD1Q96PB1 AL353803.4-201ENST00000565882 1934 ntBASIC23.77■■□□□ 1.4
CASD1Q96PB1 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
CASD1Q96PB1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CASD1Q96PB1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CASD1Q96PB1 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.77■■□□□ 1.4
CASD1Q96PB1 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.77■■□□□ 1.4
CASD1Q96PB1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.77■■□□□ 1.4
CASD1Q96PB1 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.77■■□□□ 1.4
CASD1Q96PB1 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CASD1Q96PB1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CASD1Q96PB1 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CASD1Q96PB1 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.76■■□□□ 1.39
CASD1Q96PB1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CASD1Q96PB1 AC068587.7-201ENST00000641602 218 ntBASIC23.76■■□□□ 1.39
CASD1Q96PB1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CASD1Q96PB1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.75■■□□□ 1.39
CASD1Q96PB1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CASD1Q96PB1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CASD1Q96PB1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.75■■□□□ 1.39
CASD1Q96PB1 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CASD1Q96PB1 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CASD1Q96PB1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CASD1Q96PB1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.74■■□□□ 1.39
CASD1Q96PB1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.74■■□□□ 1.39
CASD1Q96PB1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
CASD1Q96PB1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.74■■□□□ 1.39
CASD1Q96PB1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.74■■□□□ 1.39
CASD1Q96PB1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.74■■□□□ 1.39
CASD1Q96PB1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CASD1Q96PB1 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.74■■□□□ 1.39
CASD1Q96PB1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms