Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CPNE4Q96A23 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.78■□□□□ 0.76
CPNE4Q96A23 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.78■□□□□ 0.76
CPNE4Q96A23 AC091305.1-201ENST00000479476 895 ntBASIC19.78■□□□□ 0.76
CPNE4Q96A23 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE4Q96A23 AC233992.3-201ENST00000607491 485 ntBASIC19.78■□□□□ 0.76
CPNE4Q96A23 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE4Q96A23 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
CPNE4Q96A23 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.78■□□□□ 0.76
CPNE4Q96A23 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.78■□□□□ 0.76
CPNE4Q96A23 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.77■□□□□ 0.76
CPNE4Q96A23 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.77■□□□□ 0.76
CPNE4Q96A23 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CPNE4Q96A23 MIR939-201ENST00000401314 82 ntBASIC19.77■□□□□ 0.76
CPNE4Q96A23 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.77■□□□□ 0.76
CPNE4Q96A23 SUDS3P1-201ENST00000505831 966 ntBASIC19.77■□□□□ 0.76
CPNE4Q96A23 AF213884.3-201ENST00000563833 479 ntBASIC19.77■□□□□ 0.76
CPNE4Q96A23 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
CPNE4Q96A23 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
CPNE4Q96A23 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE4Q96A23 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE4Q96A23 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE4Q96A23 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE4Q96A23 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE4Q96A23 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE4Q96A23 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.76■□□□□ 0.75
CPNE4Q96A23 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE4Q96A23 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC19.76■□□□□ 0.75
CPNE4Q96A23 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE4Q96A23 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE4Q96A23 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE4Q96A23 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE4Q96A23 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CPNE4Q96A23 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE4Q96A23 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CPNE4Q96A23 DUSP8P5-201ENST00000422884 1815 ntBASIC19.75■□□□□ 0.75
CPNE4Q96A23 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CPNE4Q96A23 SLC47A1P1-202ENST00000449666 945 ntBASIC19.75■□□□□ 0.75
CPNE4Q96A23 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC19.75■□□□□ 0.75
CPNE4Q96A23 AL136967.2-201ENST00000623968 743 ntBASIC19.75■□□□□ 0.75
CPNE4Q96A23 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.75■□□□□ 0.75
CPNE4Q96A23 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CPNE4Q96A23 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.75■□□□□ 0.75
CPNE4Q96A23 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CPNE4Q96A23 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CPNE4Q96A23 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE4Q96A23 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE4Q96A23 RASA4CP-201ENST00000424092 1398 ntBASIC19.74■□□□□ 0.75
CPNE4Q96A23 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.74■□□□□ 0.75
CPNE4Q96A23 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE4Q96A23 AC008764.7-201ENST00000593779 1081 ntBASIC19.74■□□□□ 0.75
CPNE4Q96A23 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE4Q96A23 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CPNE4Q96A23 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CPNE4Q96A23 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.74■□□□□ 0.75
CPNE4Q96A23 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CPNE4Q96A23 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CPNE4Q96A23 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE4Q96A23 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.73■□□□□ 0.75
CPNE4Q96A23 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CPNE4Q96A23 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE4Q96A23 AC099791.1-201ENST00000416440 715 ntBASIC19.73■□□□□ 0.75
CPNE4Q96A23 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CPNE4Q96A23 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE4Q96A23 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.73■□□□□ 0.75
CPNE4Q96A23 AC019069.1-201ENST00000610008 1333 ntBASIC19.73■□□□□ 0.75
CPNE4Q96A23 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.73■□□□□ 0.75
CPNE4Q96A23 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CPNE4Q96A23 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE4Q96A23 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE4Q96A23 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.72■□□□□ 0.75
CPNE4Q96A23 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE4Q96A23 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE4Q96A23 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE4Q96A23 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.72■□□□□ 0.75
CPNE4Q96A23 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CPNE4Q96A23 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.72■□□□□ 0.75
CPNE4Q96A23 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CPNE4Q96A23 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE4Q96A23 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE4Q96A23 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CPNE4Q96A23 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE4Q96A23 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE4Q96A23 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CPNE4Q96A23 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE4Q96A23 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.71■□□□□ 0.75
CPNE4Q96A23 AC126544.1-201ENST00000580842 1059 ntBASIC19.71■□□□□ 0.75
CPNE4Q96A23 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.71■□□□□ 0.75
CPNE4Q96A23 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.71■□□□□ 0.75
CPNE4Q96A23 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE4Q96A23 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.71■□□□□ 0.75
CPNE4Q96A23 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE4Q96A23 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CPNE4Q96A23 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CPNE4Q96A23 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CPNE4Q96A23 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CPNE4Q96A23 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.7■□□□□ 0.74
CPNE4Q96A23 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.7■□□□□ 0.74
CPNE4Q96A23 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CPNE4Q96A23 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms