Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SHC3Q92529 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SHC3Q92529 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.63■■□□□ 1.37
SHC3Q92529 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
SHC3Q92529 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.63■■□□□ 1.37
SHC3Q92529 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
SHC3Q92529 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SHC3Q92529 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SHC3Q92529 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
SHC3Q92529 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC23.62■■□□□ 1.37
SHC3Q92529 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.62■■□□□ 1.37
SHC3Q92529 MIR4466-201ENST00000606121 54 ntBASIC23.62■■□□□ 1.37
SHC3Q92529 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
SHC3Q92529 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.62■■□□□ 1.37
SHC3Q92529 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
SHC3Q92529 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SHC3Q92529 ECEL1P1-201ENST00000373592 1742 ntBASIC23.62■■□□□ 1.37
SHC3Q92529 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.61■■□□□ 1.37
SHC3Q92529 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
SHC3Q92529 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.61■■□□□ 1.37
SHC3Q92529 SRD5A1P1-201ENST00000442297 786 ntBASIC23.61■■□□□ 1.37
SHC3Q92529 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.61■■□□□ 1.37
SHC3Q92529 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.61■■□□□ 1.37
SHC3Q92529 LINC01960-201ENST00000563759 1884 ntBASIC23.6■■□□□ 1.37
SHC3Q92529 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHC3Q92529 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHC3Q92529 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHC3Q92529 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHC3Q92529 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.6■■□□□ 1.37
SHC3Q92529 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
SHC3Q92529 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
SHC3Q92529 TRIR-202ENST00000588213 841 ntTSL 3 BASIC23.6■■□□□ 1.37
SHC3Q92529 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.6■■□□□ 1.37
SHC3Q92529 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.6■■□□□ 1.37
SHC3Q92529 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
SHC3Q92529 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
SHC3Q92529 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
SHC3Q92529 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC23.59■■□□□ 1.37
SHC3Q92529 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SHC3Q92529 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
SHC3Q92529 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
SHC3Q92529 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
SHC3Q92529 AC131281.2-201ENST00000520478 145 ntBASIC23.59■■□□□ 1.37
SHC3Q92529 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
SHC3Q92529 EP400NL-214ENST00000641289 2402 ntBASIC23.59■■□□□ 1.37
SHC3Q92529 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
SHC3Q92529 pRNA.6-201ENST00000610482 90 ntBASIC23.58■■□□□ 1.37
SHC3Q92529 pRNA.5-201ENST00000612139 90 ntBASIC23.58■■□□□ 1.37
SHC3Q92529 pRNA.11-201ENST00000618423 90 ntBASIC23.58■■□□□ 1.37
SHC3Q92529 pRNA.13-201ENST00000619112 90 ntBASIC23.58■■□□□ 1.37
SHC3Q92529 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.58■■□□□ 1.37
SHC3Q92529 AC242852.2-201ENST00000615738 1807 ntBASIC23.58■■□□□ 1.37
SHC3Q92529 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.58■■□□□ 1.36
SHC3Q92529 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
SHC3Q92529 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SHC3Q92529 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SHC3Q92529 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.57■■□□□ 1.36
SHC3Q92529 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
SHC3Q92529 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SHC3Q92529 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.57■■□□□ 1.36
SHC3Q92529 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.57■■□□□ 1.36
SHC3Q92529 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.57■■□□□ 1.36
SHC3Q92529 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SHC3Q92529 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SHC3Q92529 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
SHC3Q92529 AC133637.1-201ENST00000624115 1537 ntBASIC23.57■■□□□ 1.36
SHC3Q92529 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
SHC3Q92529 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHC3Q92529 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SHC3Q92529 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHC3Q92529 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.56■■□□□ 1.36
SHC3Q92529 MIR3181-201ENST00000578512 73 ntBASIC23.56■■□□□ 1.36
SHC3Q92529 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SHC3Q92529 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.56■■□□□ 1.36
SHC3Q92529 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHC3Q92529 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHC3Q92529 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHC3Q92529 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.56■■□□□ 1.36
SHC3Q92529 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHC3Q92529 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHC3Q92529 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
SHC3Q92529 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC23.56■■□□□ 1.36
SHC3Q92529 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
SHC3Q92529 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
SHC3Q92529 LINC00526-201ENST00000581067 1875 ntBASIC23.56■■□□□ 1.36
SHC3Q92529 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
SHC3Q92529 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.55■■□□□ 1.36
SHC3Q92529 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SHC3Q92529 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.55■■□□□ 1.36
SHC3Q92529 AC080038.3-201ENST00000623346 1952 ntBASIC23.55■■□□□ 1.36
SHC3Q92529 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.55■■□□□ 1.36
SHC3Q92529 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
SHC3Q92529 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SHC3Q92529 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SHC3Q92529 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
SHC3Q92529 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.54■■□□□ 1.36
SHC3Q92529 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
SHC3Q92529 AC092171.4-201ENST00000609130 632 ntBASIC23.54■■□□□ 1.36
SHC3Q92529 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.54■■□□□ 1.36
SHC3Q92529 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms