Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC34.8■■■■□ 3.16
CASKIN1Q8WXD9 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC34.79■■■■□ 3.16
CASKIN1Q8WXD9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CASKIN1Q8WXD9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC34.79■■■■□ 3.16
CASKIN1Q8WXD9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC34.79■■■■□ 3.16
CASKIN1Q8WXD9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CASKIN1Q8WXD9 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
CASKIN1Q8WXD9 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC34.78■■■■□ 3.16
CASKIN1Q8WXD9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC34.78■■■■□ 3.16
CASKIN1Q8WXD9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
CASKIN1Q8WXD9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC34.78■■■■□ 3.16
CASKIN1Q8WXD9 RARRES2P11-201ENST00000635158 484 ntBASIC34.78■■■■□ 3.16
CASKIN1Q8WXD9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC34.78■■■■□ 3.16
CASKIN1Q8WXD9 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC34.78■■■■□ 3.16
CASKIN1Q8WXD9 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC34.78■■■■□ 3.16
CASKIN1Q8WXD9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC34.77■■■■□ 3.16
CASKIN1Q8WXD9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CASKIN1Q8WXD9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC34.77■■■■□ 3.16
CASKIN1Q8WXD9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC34.77■■■■□ 3.16
CASKIN1Q8WXD9 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC34.77■■■■□ 3.16
CASKIN1Q8WXD9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC34.77■■■■□ 3.16
CASKIN1Q8WXD9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CASKIN1Q8WXD9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC34.77■■■■□ 3.16
CASKIN1Q8WXD9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CASKIN1Q8WXD9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
CASKIN1Q8WXD9 ABCB10P4-201ENST00000566803 2184 ntBASIC34.76■■■■□ 3.16
CASKIN1Q8WXD9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
CASKIN1Q8WXD9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.16
CASKIN1Q8WXD9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC34.76■■■■□ 3.16
CASKIN1Q8WXD9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC34.76■■■■□ 3.16
CASKIN1Q8WXD9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC34.76■■■■□ 3.15
CASKIN1Q8WXD9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC34.76■■■■□ 3.15
CASKIN1Q8WXD9 AL353803.4-201ENST00000565882 1934 ntBASIC34.76■■■■□ 3.15
CASKIN1Q8WXD9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC34.75■■■■□ 3.15
CASKIN1Q8WXD9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC34.75■■■■□ 3.15
CASKIN1Q8WXD9 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC34.75■■■■□ 3.15
CASKIN1Q8WXD9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC34.75■■■■□ 3.15
CASKIN1Q8WXD9 AL137784.2-201ENST00000607332 1000 ntBASIC34.75■■■■□ 3.15
CASKIN1Q8WXD9 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CASKIN1Q8WXD9 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CASKIN1Q8WXD9 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
CASKIN1Q8WXD9 AC090192.1-201ENST00000517740 490 ntBASIC34.74■■■■□ 3.15
CASKIN1Q8WXD9 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
CASKIN1Q8WXD9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
CASKIN1Q8WXD9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC34.74■■■■□ 3.15
CASKIN1Q8WXD9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC34.74■■■■□ 3.15
CASKIN1Q8WXD9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
CASKIN1Q8WXD9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
CASKIN1Q8WXD9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC34.73■■■■□ 3.15
CASKIN1Q8WXD9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
CASKIN1Q8WXD9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
CASKIN1Q8WXD9 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC34.73■■■■□ 3.15
CASKIN1Q8WXD9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC34.72■■■■□ 3.15
CASKIN1Q8WXD9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
CASKIN1Q8WXD9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC34.72■■■■□ 3.15
CASKIN1Q8WXD9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC34.72■■■■□ 3.15
CASKIN1Q8WXD9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC34.72■■■■□ 3.15
CASKIN1Q8WXD9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CASKIN1Q8WXD9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC34.72■■■■□ 3.15
CASKIN1Q8WXD9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC34.72■■■■□ 3.15
CASKIN1Q8WXD9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
CASKIN1Q8WXD9 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
CASKIN1Q8WXD9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC34.71■■■■□ 3.15
CASKIN1Q8WXD9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC34.71■■■■□ 3.15
CASKIN1Q8WXD9 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC34.71■■■■□ 3.15
CASKIN1Q8WXD9 AC068587.7-201ENST00000641602 218 ntBASIC34.71■■■■□ 3.15
CASKIN1Q8WXD9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
CASKIN1Q8WXD9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.15
CASKIN1Q8WXD9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
CASKIN1Q8WXD9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
CASKIN1Q8WXD9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC34.69■■■■□ 3.14
CASKIN1Q8WXD9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CASKIN1Q8WXD9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC34.69■■■■□ 3.14
CASKIN1Q8WXD9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CASKIN1Q8WXD9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CASKIN1Q8WXD9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC34.69■■■■□ 3.14
CASKIN1Q8WXD9 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
CASKIN1Q8WXD9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
CASKIN1Q8WXD9 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
CASKIN1Q8WXD9 NTF6G-201ENST00000591094 616 ntBASIC34.69■■■■□ 3.14
CASKIN1Q8WXD9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC34.69■■■■□ 3.14
CASKIN1Q8WXD9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
CASKIN1Q8WXD9 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC34.67■■■■□ 3.14
CASKIN1Q8WXD9 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC34.67■■■■□ 3.14
CASKIN1Q8WXD9 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC34.67■■■■□ 3.14
CASKIN1Q8WXD9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC34.67■■■■□ 3.14
CASKIN1Q8WXD9 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC34.67■■■■□ 3.14
CASKIN1Q8WXD9 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC34.67■■■■□ 3.14
CASKIN1Q8WXD9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CASKIN1Q8WXD9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC34.66■■■■□ 3.14
CASKIN1Q8WXD9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
CASKIN1Q8WXD9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC34.66■■■■□ 3.14
CASKIN1Q8WXD9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
CASKIN1Q8WXD9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC34.66■■■■□ 3.14
CASKIN1Q8WXD9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC34.65■■■■□ 3.14
CASKIN1Q8WXD9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC34.65■■■■□ 3.14
CASKIN1Q8WXD9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CASKIN1Q8WXD9 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC34.64■■■■□ 3.14
CASKIN1Q8WXD9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CASKIN1Q8WXD9 SMUG1P1-201ENST00000590640 811 ntBASIC34.64■■■■□ 3.14
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms