Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 AC034268.1-201ENST00000441047 882 ntBASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 DUX4L2-201ENST00000561772 1275 ntBASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 DUX4L6-201ENST00000626483 1275 ntBASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 DUX4L1-201ENST00000627662 1275 ntBASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 DUX4L8-201ENST00000629013 1275 ntBASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 DUX4L3-201ENST00000630187 1275 ntBASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 DUX4L7-201ENST00000630678 1275 ntBASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 DUX4L5-201ENST00000630834 1275 ntBASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.38■■□□□ 1.81
SH3RF3Q8TEJ3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SH3RF3Q8TEJ3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
SH3RF3Q8TEJ3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
SH3RF3Q8TEJ3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC26.37■■□□□ 1.81
SH3RF3Q8TEJ3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC26.37■■□□□ 1.81
SH3RF3Q8TEJ3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.36■■□□□ 1.81
SH3RF3Q8TEJ3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SH3RF3Q8TEJ3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SH3RF3Q8TEJ3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.36■■□□□ 1.81
SH3RF3Q8TEJ3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SH3RF3Q8TEJ3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.36■■□□□ 1.81
SH3RF3Q8TEJ3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
SH3RF3Q8TEJ3 AC123595.1-201ENST00000440769 1046 ntBASIC26.36■■□□□ 1.81
SH3RF3Q8TEJ3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.36■■□□□ 1.81
SH3RF3Q8TEJ3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC26.36■■□□□ 1.81
SH3RF3Q8TEJ3 AC105233.4-201ENST00000642045 216 ntBASIC26.36■■□□□ 1.81
SH3RF3Q8TEJ3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SH3RF3Q8TEJ3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SH3RF3Q8TEJ3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.36■■□□□ 1.81
SH3RF3Q8TEJ3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.35■■□□□ 1.81
SH3RF3Q8TEJ3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
SH3RF3Q8TEJ3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SH3RF3Q8TEJ3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
SH3RF3Q8TEJ3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.35■■□□□ 1.81
SH3RF3Q8TEJ3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
SH3RF3Q8TEJ3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.35■■□□□ 1.81
SH3RF3Q8TEJ3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SH3RF3Q8TEJ3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SH3RF3Q8TEJ3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
SH3RF3Q8TEJ3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SH3RF3Q8TEJ3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SH3RF3Q8TEJ3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC26.34■■□□□ 1.81
SH3RF3Q8TEJ3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
SH3RF3Q8TEJ3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC26.34■■□□□ 1.81
SH3RF3Q8TEJ3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.34■■□□□ 1.81
SH3RF3Q8TEJ3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC26.34■■□□□ 1.81
SH3RF3Q8TEJ3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.34■■□□□ 1.81
SH3RF3Q8TEJ3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26.34■■□□□ 1.81
SH3RF3Q8TEJ3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC26.34■■□□□ 1.81
SH3RF3Q8TEJ3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
SH3RF3Q8TEJ3 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
SH3RF3Q8TEJ3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
SH3RF3Q8TEJ3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
SH3RF3Q8TEJ3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
SH3RF3Q8TEJ3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.33■■□□□ 1.81
SH3RF3Q8TEJ3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.33■■□□□ 1.81
SH3RF3Q8TEJ3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SH3RF3Q8TEJ3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.33■■□□□ 1.81
SH3RF3Q8TEJ3 KRT18P5-201ENST00000436075 1291 ntBASIC26.33■■□□□ 1.81
SH3RF3Q8TEJ3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SH3RF3Q8TEJ3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
SH3RF3Q8TEJ3 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC26.33■■□□□ 1.81
SH3RF3Q8TEJ3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC26.33■■□□□ 1.81
SH3RF3Q8TEJ3 CCDC92B-201ENST00000575506 885 ntBASIC26.33■■□□□ 1.81
SH3RF3Q8TEJ3 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.33■■□□□ 1.81
SH3RF3Q8TEJ3 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
SH3RF3Q8TEJ3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC26.32■■□□□ 1.8
SH3RF3Q8TEJ3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SH3RF3Q8TEJ3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.32■■□□□ 1.8
SH3RF3Q8TEJ3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC26.32■■□□□ 1.8
SH3RF3Q8TEJ3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.32■■□□□ 1.8
SH3RF3Q8TEJ3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC26.32■■□□□ 1.8
SH3RF3Q8TEJ3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SH3RF3Q8TEJ3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.32■■□□□ 1.8
SH3RF3Q8TEJ3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC26.32■■□□□ 1.8
SH3RF3Q8TEJ3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
SH3RF3Q8TEJ3 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.32■■□□□ 1.8
SH3RF3Q8TEJ3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
SH3RF3Q8TEJ3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
SH3RF3Q8TEJ3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.31■■□□□ 1.8
SH3RF3Q8TEJ3 NT5C3AP1-201ENST00000394500 1012 ntBASIC26.31■■□□□ 1.8
SH3RF3Q8TEJ3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC26.31■■□□□ 1.8
SH3RF3Q8TEJ3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.31■■□□□ 1.8
SH3RF3Q8TEJ3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.31■■□□□ 1.8
SH3RF3Q8TEJ3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
SH3RF3Q8TEJ3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.31■■□□□ 1.8
SH3RF3Q8TEJ3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SH3RF3Q8TEJ3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
SH3RF3Q8TEJ3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26.3■■□□□ 1.8
SH3RF3Q8TEJ3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
SH3RF3Q8TEJ3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.3■■□□□ 1.8
SH3RF3Q8TEJ3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
SH3RF3Q8TEJ3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SH3RF3Q8TEJ3 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
SH3RF3Q8TEJ3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC26.3■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms