Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH19Q8TAB3 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH19Q8TAB3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDH19Q8TAB3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC22.82■■□□□ 1.24
PCDH19Q8TAB3 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
PCDH19Q8TAB3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PCDH19Q8TAB3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.82■■□□□ 1.24
PCDH19Q8TAB3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH19Q8TAB3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDH19Q8TAB3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
PCDH19Q8TAB3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH19Q8TAB3 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH19Q8TAB3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDH19Q8TAB3 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
PCDH19Q8TAB3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.81■■□□□ 1.24
PCDH19Q8TAB3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH19Q8TAB3 AC099791.2-201ENST00000605725 427 ntBASIC22.81■■□□□ 1.24
PCDH19Q8TAB3 EP400NL-214ENST00000641289 2402 ntBASIC22.81■■□□□ 1.24
PCDH19Q8TAB3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH19Q8TAB3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH19Q8TAB3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH19Q8TAB3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.81■■□□□ 1.24
PCDH19Q8TAB3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PCDH19Q8TAB3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 AL136116.3-201ENST00000402907 1138 ntBASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 AC127496.7-201ENST00000625110 1798 ntBASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 AC079834.2-201ENST00000609776 1949 ntBASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PCDH19Q8TAB3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
PCDH19Q8TAB3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH19Q8TAB3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
PCDH19Q8TAB3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.79■■□□□ 1.24
PCDH19Q8TAB3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH19Q8TAB3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH19Q8TAB3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
PCDH19Q8TAB3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
PCDH19Q8TAB3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
PCDH19Q8TAB3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH19Q8TAB3 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
PCDH19Q8TAB3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PCDH19Q8TAB3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH19Q8TAB3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH19Q8TAB3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.78■■□□□ 1.24
PCDH19Q8TAB3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH19Q8TAB3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH19Q8TAB3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH19Q8TAB3 MIR4466-201ENST00000606121 54 ntBASIC22.78■■□□□ 1.24
PCDH19Q8TAB3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDH19Q8TAB3 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.78■■□□□ 1.24
PCDH19Q8TAB3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH19Q8TAB3 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH19Q8TAB3 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
PCDH19Q8TAB3 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
PCDH19Q8TAB3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDH19Q8TAB3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
PCDH19Q8TAB3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDH19Q8TAB3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDH19Q8TAB3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC22.77■■□□□ 1.24
PCDH19Q8TAB3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.77■■□□□ 1.24
PCDH19Q8TAB3 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
PCDH19Q8TAB3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 pRNA.6-201ENST00000610482 90 ntBASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 pRNA.5-201ENST00000612139 90 ntBASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 pRNA.11-201ENST00000618423 90 ntBASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 pRNA.13-201ENST00000619112 90 ntBASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDH19Q8TAB3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH19Q8TAB3 LINC01960-201ENST00000563759 1884 ntBASIC22.75■■□□□ 1.23
PCDH19Q8TAB3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.75■■□□□ 1.23
PCDH19Q8TAB3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDH19Q8TAB3 ECEL1P1-201ENST00000373592 1742 ntBASIC22.75■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms