Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SLC44A5Q8NCS7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.09■■□□□ 1.77
SLC44A5Q8NCS7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.09■■□□□ 1.77
SLC44A5Q8NCS7 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.09■■□□□ 1.77
SLC44A5Q8NCS7 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SLC44A5Q8NCS7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SLC44A5Q8NCS7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.09■■□□□ 1.77
SLC44A5Q8NCS7 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SLC44A5Q8NCS7 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SLC44A5Q8NCS7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SLC44A5Q8NCS7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.08■■□□□ 1.77
SLC44A5Q8NCS7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
SLC44A5Q8NCS7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC26.08■■□□□ 1.77
SLC44A5Q8NCS7 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC26.08■■□□□ 1.77
SLC44A5Q8NCS7 AL162430.1-201ENST00000480705 870 ntBASIC26.08■■□□□ 1.77
SLC44A5Q8NCS7 AC012414.1-201ENST00000556676 535 ntBASIC26.08■■□□□ 1.77
SLC44A5Q8NCS7 AC104564.3-201ENST00000582367 638 ntBASIC26.08■■□□□ 1.77
SLC44A5Q8NCS7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.08■■□□□ 1.77
SLC44A5Q8NCS7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC26.08■■□□□ 1.77
SLC44A5Q8NCS7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
SLC44A5Q8NCS7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
SLC44A5Q8NCS7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SLC44A5Q8NCS7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC26.08■■□□□ 1.77
SLC44A5Q8NCS7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
SLC44A5Q8NCS7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SLC44A5Q8NCS7 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SLC44A5Q8NCS7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SLC44A5Q8NCS7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC26.07■■□□□ 1.76
SLC44A5Q8NCS7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.07■■□□□ 1.76
SLC44A5Q8NCS7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SLC44A5Q8NCS7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
SLC44A5Q8NCS7 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
SLC44A5Q8NCS7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.06■■□□□ 1.76
SLC44A5Q8NCS7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SLC44A5Q8NCS7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SLC44A5Q8NCS7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SLC44A5Q8NCS7 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.06■■□□□ 1.76
SLC44A5Q8NCS7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SLC44A5Q8NCS7 AC092068.2-201ENST00000590491 1708 ntBASIC26.06■■□□□ 1.76
SLC44A5Q8NCS7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SLC44A5Q8NCS7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SLC44A5Q8NCS7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC44A5Q8NCS7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.05■■□□□ 1.76
SLC44A5Q8NCS7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.05■■□□□ 1.76
SLC44A5Q8NCS7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SLC44A5Q8NCS7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SLC44A5Q8NCS7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC26.05■■□□□ 1.76
SLC44A5Q8NCS7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.05■■□□□ 1.76
SLC44A5Q8NCS7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SLC44A5Q8NCS7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SLC44A5Q8NCS7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
SLC44A5Q8NCS7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
SLC44A5Q8NCS7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.04■■□□□ 1.76
SLC44A5Q8NCS7 YBX1P1-201ENST00000445822 960 ntBASIC26.04■■□□□ 1.76
SLC44A5Q8NCS7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SLC44A5Q8NCS7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.04■■□□□ 1.76
SLC44A5Q8NCS7 AL358852.1-201ENST00000623174 1268 ntBASIC26.04■■□□□ 1.76
SLC44A5Q8NCS7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLC44A5Q8NCS7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLC44A5Q8NCS7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SLC44A5Q8NCS7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLC44A5Q8NCS7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLC44A5Q8NCS7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.03■■□□□ 1.76
SLC44A5Q8NCS7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
SLC44A5Q8NCS7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.03■■□□□ 1.76
SLC44A5Q8NCS7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC26.03■■□□□ 1.76
SLC44A5Q8NCS7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC26.03■■□□□ 1.76
SLC44A5Q8NCS7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.03■■□□□ 1.76
SLC44A5Q8NCS7 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
SLC44A5Q8NCS7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC26.02■■□□□ 1.76
SLC44A5Q8NCS7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
SLC44A5Q8NCS7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.02■■□□□ 1.76
SLC44A5Q8NCS7 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SLC44A5Q8NCS7 AC027612.3-201ENST00000413684 1047 ntBASIC26.02■■□□□ 1.76
SLC44A5Q8NCS7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC26.02■■□□□ 1.76
SLC44A5Q8NCS7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.02■■□□□ 1.76
SLC44A5Q8NCS7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC26.02■■□□□ 1.76
SLC44A5Q8NCS7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SLC44A5Q8NCS7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC26.02■■□□□ 1.76
SLC44A5Q8NCS7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.02■■□□□ 1.76
SLC44A5Q8NCS7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SLC44A5Q8NCS7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC26.01■■□□□ 1.75
SLC44A5Q8NCS7 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
SLC44A5Q8NCS7 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.01■■□□□ 1.75
SLC44A5Q8NCS7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.01■■□□□ 1.75
SLC44A5Q8NCS7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SLC44A5Q8NCS7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC26■■□□□ 1.75
SLC44A5Q8NCS7 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SLC44A5Q8NCS7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26■■□□□ 1.75
SLC44A5Q8NCS7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
SLC44A5Q8NCS7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC26■■□□□ 1.75
SLC44A5Q8NCS7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SLC44A5Q8NCS7 AL354811.1-201ENST00000610286 706 ntBASIC26■■□□□ 1.75
SLC44A5Q8NCS7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC26■■□□□ 1.75
SLC44A5Q8NCS7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26■■□□□ 1.75
SLC44A5Q8NCS7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC26■■□□□ 1.75
SLC44A5Q8NCS7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
SLC44A5Q8NCS7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
SLC44A5Q8NCS7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC25.99■■□□□ 1.75
SLC44A5Q8NCS7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms