Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 AL050303.2-201ENST00000619798 666 ntBASIC23.11■■□□□ 1.29
SMRP1Q8NCR6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
SMRP1Q8NCR6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SMRP1Q8NCR6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC23.1■■□□□ 1.29
SMRP1Q8NCR6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC23.1■■□□□ 1.29
SMRP1Q8NCR6 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SMRP1Q8NCR6 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMRP1Q8NCR6 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMRP1Q8NCR6 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
SMRP1Q8NCR6 TSPY6P-201ENST00000448518 926 ntBASIC23.1■■□□□ 1.29
SMRP1Q8NCR6 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMRP1Q8NCR6 PARP1-210ENST00000629232 477 ntTSL 5 BASIC23.1■■□□□ 1.29
SMRP1Q8NCR6 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.1■■□□□ 1.29
SMRP1Q8NCR6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMRP1Q8NCR6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SMRP1Q8NCR6 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SMRP1Q8NCR6 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.09■■□□□ 1.29
SMRP1Q8NCR6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.09■■□□□ 1.29
SMRP1Q8NCR6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMRP1Q8NCR6 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMRP1Q8NCR6 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.09■■□□□ 1.29
SMRP1Q8NCR6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SMRP1Q8NCR6 AL121749.1-202ENST00000609313 2153 ntBASIC23.09■■□□□ 1.29
SMRP1Q8NCR6 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
SMRP1Q8NCR6 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
SMRP1Q8NCR6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC23.09■■□□□ 1.29
SMRP1Q8NCR6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.09■■□□□ 1.29
SMRP1Q8NCR6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SMRP1Q8NCR6 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.09■■□□□ 1.29
SMRP1Q8NCR6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.09■■□□□ 1.29
SMRP1Q8NCR6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.09■■□□□ 1.29
SMRP1Q8NCR6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SMRP1Q8NCR6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SMRP1Q8NCR6 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMRP1Q8NCR6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMRP1Q8NCR6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SMRP1Q8NCR6 AC083906.2-201ENST00000511578 360 ntBASIC23.08■■□□□ 1.29
SMRP1Q8NCR6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.08■■□□□ 1.29
SMRP1Q8NCR6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SMRP1Q8NCR6 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
SMRP1Q8NCR6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SMRP1Q8NCR6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SMRP1Q8NCR6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMRP1Q8NCR6 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SMRP1Q8NCR6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
SMRP1Q8NCR6 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMRP1Q8NCR6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC23.07■■□□□ 1.28
SMRP1Q8NCR6 GUSBP6-202ENST00000438529 1198 ntBASIC23.07■■□□□ 1.28
SMRP1Q8NCR6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
SMRP1Q8NCR6 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.07■■□□□ 1.28
SMRP1Q8NCR6 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.07■■□□□ 1.28
SMRP1Q8NCR6 SMUG1P1-201ENST00000590640 811 ntBASIC23.07■■□□□ 1.28
SMRP1Q8NCR6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMRP1Q8NCR6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SMRP1Q8NCR6 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMRP1Q8NCR6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMRP1Q8NCR6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SMRP1Q8NCR6 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMRP1Q8NCR6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.06■■□□□ 1.28
SMRP1Q8NCR6 AC079140.4-201ENST00000507448 529 ntBASIC23.06■■□□□ 1.28
SMRP1Q8NCR6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.06■■□□□ 1.28
SMRP1Q8NCR6 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.06■■□□□ 1.28
SMRP1Q8NCR6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMRP1Q8NCR6 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SMRP1Q8NCR6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SMRP1Q8NCR6 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.05■■□□□ 1.28
SMRP1Q8NCR6 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMRP1Q8NCR6 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMRP1Q8NCR6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.05■■□□□ 1.28
SMRP1Q8NCR6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.05■■□□□ 1.28
SMRP1Q8NCR6 SLC7A5P2-201ENST00000553010 536 ntBASIC23.05■■□□□ 1.28
SMRP1Q8NCR6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.05■■□□□ 1.28
SMRP1Q8NCR6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC23.05■■□□□ 1.28
SMRP1Q8NCR6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.05■■□□□ 1.28
SMRP1Q8NCR6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.05■■□□□ 1.28
SMRP1Q8NCR6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.05■■□□□ 1.28
SMRP1Q8NCR6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
SMRP1Q8NCR6 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
SMRP1Q8NCR6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
SMRP1Q8NCR6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMRP1Q8NCR6 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMRP1Q8NCR6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMRP1Q8NCR6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
SMRP1Q8NCR6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SMRP1Q8NCR6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SMRP1Q8NCR6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
SMRP1Q8NCR6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.04■■□□□ 1.28
SMRP1Q8NCR6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.04■■□□□ 1.28
SMRP1Q8NCR6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC23.04■■□□□ 1.28
SMRP1Q8NCR6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
SMRP1Q8NCR6 AC068587.7-201ENST00000641602 218 ntBASIC23.04■■□□□ 1.28
SMRP1Q8NCR6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
SMRP1Q8NCR6 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC23.04■■□□□ 1.28
SMRP1Q8NCR6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC23.03■■□□□ 1.28
SMRP1Q8NCR6 MIR4651-201ENST00000582622 73 ntBASIC23.03■■□□□ 1.28
SMRP1Q8NCR6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.03■■□□□ 1.28
SMRP1Q8NCR6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.03■■□□□ 1.28
SMRP1Q8NCR6 AC231657.2-201ENST00000624556 255 ntBASIC23.03■■□□□ 1.28
SMRP1Q8NCR6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23.03■■□□□ 1.28
SMRP1Q8NCR6 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms