Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 AP005435.1-201ENST00000529293 1178 ntBASIC24.05■■□□□ 1.44
RNF169Q8NCN4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC24.05■■□□□ 1.44
RNF169Q8NCN4 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RNF169Q8NCN4 AC004687.1-201ENST00000579003 1625 ntBASIC24.05■■□□□ 1.44
RNF169Q8NCN4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RNF169Q8NCN4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.04■■□□□ 1.44
RNF169Q8NCN4 CCDC92B-201ENST00000575506 885 ntBASIC24.04■■□□□ 1.44
RNF169Q8NCN4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC24.04■■□□□ 1.44
RNF169Q8NCN4 AC105233.4-201ENST00000642045 216 ntBASIC24.04■■□□□ 1.44
RNF169Q8NCN4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.03■■□□□ 1.44
RNF169Q8NCN4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RNF169Q8NCN4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
RNF169Q8NCN4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF169Q8NCN4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF169Q8NCN4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC24.03■■□□□ 1.44
RNF169Q8NCN4 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.03■■□□□ 1.44
RNF169Q8NCN4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RNF169Q8NCN4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC24.03■■□□□ 1.44
RNF169Q8NCN4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RNF169Q8NCN4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.02■■□□□ 1.44
RNF169Q8NCN4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF169Q8NCN4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF169Q8NCN4 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.02■■□□□ 1.44
RNF169Q8NCN4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RNF169Q8NCN4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF169Q8NCN4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF169Q8NCN4 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF169Q8NCN4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RNF169Q8NCN4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
RNF169Q8NCN4 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.01■■□□□ 1.43
RNF169Q8NCN4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF169Q8NCN4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
RNF169Q8NCN4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF169Q8NCN4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF169Q8NCN4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24■■□□□ 1.43
RNF169Q8NCN4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24■■□□□ 1.43
RNF169Q8NCN4 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC24■■□□□ 1.43
RNF169Q8NCN4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF169Q8NCN4 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24■■□□□ 1.43
RNF169Q8NCN4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF169Q8NCN4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC24■■□□□ 1.43
RNF169Q8NCN4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RNF169Q8NCN4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24■■□□□ 1.43
RNF169Q8NCN4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
RNF169Q8NCN4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
RNF169Q8NCN4 AL353803.4-201ENST00000565882 1934 ntBASIC24■■□□□ 1.43
RNF169Q8NCN4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
RNF169Q8NCN4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.99■■□□□ 1.43
RNF169Q8NCN4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.99■■□□□ 1.43
RNF169Q8NCN4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
RNF169Q8NCN4 GXYLT1P2-201ENST00000433312 1230 ntBASIC23.99■■□□□ 1.43
RNF169Q8NCN4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF169Q8NCN4 KRT18P14-201ENST00000534205 1250 ntBASIC23.99■■□□□ 1.43
RNF169Q8NCN4 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.99■■□□□ 1.43
RNF169Q8NCN4 AL137784.2-201ENST00000607332 1000 ntBASIC23.99■■□□□ 1.43
RNF169Q8NCN4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF169Q8NCN4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.99■■□□□ 1.43
RNF169Q8NCN4 LINC02228-203ENST00000641970 1355 ntBASIC23.99■■□□□ 1.43
RNF169Q8NCN4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF169Q8NCN4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF169Q8NCN4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF169Q8NCN4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RNF169Q8NCN4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF169Q8NCN4 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC23.98■■□□□ 1.43
RNF169Q8NCN4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.98■■□□□ 1.43
RNF169Q8NCN4 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.98■■□□□ 1.43
RNF169Q8NCN4 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RNF169Q8NCN4 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
RNF169Q8NCN4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RNF169Q8NCN4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
RNF169Q8NCN4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF169Q8NCN4 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF169Q8NCN4 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.97■■□□□ 1.43
RNF169Q8NCN4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF169Q8NCN4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF169Q8NCN4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RNF169Q8NCN4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF169Q8NCN4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC23.97■■□□□ 1.43
RNF169Q8NCN4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
RNF169Q8NCN4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF169Q8NCN4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF169Q8NCN4 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RNF169Q8NCN4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RNF169Q8NCN4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms