Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.28■□□□□ 0.36
C3orf56Q8N813 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
C3orf56Q8N813 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.28■□□□□ 0.36
C3orf56Q8N813 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C3orf56Q8N813 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.28■□□□□ 0.36
C3orf56Q8N813 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
C3orf56Q8N813 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
C3orf56Q8N813 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
C3orf56Q8N813 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.28■□□□□ 0.36
C3orf56Q8N813 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
C3orf56Q8N813 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
C3orf56Q8N813 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.27■□□□□ 0.36
C3orf56Q8N813 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C3orf56Q8N813 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.27■□□□□ 0.36
C3orf56Q8N813 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
C3orf56Q8N813 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.27■□□□□ 0.36
C3orf56Q8N813 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
C3orf56Q8N813 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
C3orf56Q8N813 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
C3orf56Q8N813 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C3orf56Q8N813 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
C3orf56Q8N813 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
C3orf56Q8N813 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C3orf56Q8N813 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C3orf56Q8N813 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
C3orf56Q8N813 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C3orf56Q8N813 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.26■□□□□ 0.35
C3orf56Q8N813 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.26■□□□□ 0.35
C3orf56Q8N813 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C3orf56Q8N813 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
C3orf56Q8N813 TSPY6P-201ENST00000448518 926 ntBASIC17.26■□□□□ 0.35
C3orf56Q8N813 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.26■□□□□ 0.35
C3orf56Q8N813 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C3orf56Q8N813 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.26■□□□□ 0.35
C3orf56Q8N813 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.26■□□□□ 0.35
C3orf56Q8N813 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C3orf56Q8N813 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.26■□□□□ 0.35
C3orf56Q8N813 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC17.26■□□□□ 0.35
C3orf56Q8N813 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.26■□□□□ 0.35
C3orf56Q8N813 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C3orf56Q8N813 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
C3orf56Q8N813 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
C3orf56Q8N813 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C3orf56Q8N813 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
C3orf56Q8N813 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C3orf56Q8N813 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
C3orf56Q8N813 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
C3orf56Q8N813 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
C3orf56Q8N813 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C3orf56Q8N813 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C3orf56Q8N813 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
C3orf56Q8N813 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
C3orf56Q8N813 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
C3orf56Q8N813 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
C3orf56Q8N813 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
C3orf56Q8N813 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
C3orf56Q8N813 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.25■□□□□ 0.35
C3orf56Q8N813 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.25■□□□□ 0.35
C3orf56Q8N813 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.25■□□□□ 0.35
C3orf56Q8N813 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC17.25■□□□□ 0.35
C3orf56Q8N813 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.25■□□□□ 0.35
C3orf56Q8N813 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.25■□□□□ 0.35
C3orf56Q8N813 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
C3orf56Q8N813 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.25■□□□□ 0.35
C3orf56Q8N813 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
C3orf56Q8N813 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
C3orf56Q8N813 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
C3orf56Q8N813 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
C3orf56Q8N813 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.24■□□□□ 0.35
C3orf56Q8N813 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC17.24■□□□□ 0.35
C3orf56Q8N813 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
C3orf56Q8N813 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.24■□□□□ 0.35
C3orf56Q8N813 AC231657.2-201ENST00000624556 255 ntBASIC17.24■□□□□ 0.35
C3orf56Q8N813 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.24■□□□□ 0.35
C3orf56Q8N813 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
C3orf56Q8N813 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
C3orf56Q8N813 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C3orf56Q8N813 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C3orf56Q8N813 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
C3orf56Q8N813 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C3orf56Q8N813 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C3orf56Q8N813 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C3orf56Q8N813 AC092803.2-201ENST00000564287 1899 ntBASIC17.23■□□□□ 0.35
C3orf56Q8N813 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
C3orf56Q8N813 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
C3orf56Q8N813 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.23■□□□□ 0.35
C3orf56Q8N813 AC007322.1-201ENST00000426983 750 ntBASIC17.23■□□□□ 0.35
C3orf56Q8N813 AC079140.4-201ENST00000507448 529 ntBASIC17.23■□□□□ 0.35
C3orf56Q8N813 MIR4651-201ENST00000582622 73 ntBASIC17.23■□□□□ 0.35
C3orf56Q8N813 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.23■□□□□ 0.35
C3orf56Q8N813 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.23■□□□□ 0.35
C3orf56Q8N813 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.23■□□□□ 0.35
C3orf56Q8N813 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C3orf56Q8N813 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C3orf56Q8N813 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
C3orf56Q8N813 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.22■□□□□ 0.35
C3orf56Q8N813 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C3orf56Q8N813 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
C3orf56Q8N813 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.22■□□□□ 0.35
C3orf56Q8N813 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms