Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.36■■□□□ 1.33
RNF135Q8IUD6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
RNF135Q8IUD6 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF135Q8IUD6 KRT18P61-201ENST00000585825 1298 ntBASIC23.36■■□□□ 1.33
RNF135Q8IUD6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC23.36■■□□□ 1.33
RNF135Q8IUD6 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC23.36■■□□□ 1.33
RNF135Q8IUD6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
RNF135Q8IUD6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.36■■□□□ 1.33
RNF135Q8IUD6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF135Q8IUD6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF135Q8IUD6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF135Q8IUD6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.35■■□□□ 1.33
RNF135Q8IUD6 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.35■■□□□ 1.33
RNF135Q8IUD6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC23.35■■□□□ 1.33
RNF135Q8IUD6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF135Q8IUD6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF135Q8IUD6 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF135Q8IUD6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.35■■□□□ 1.33
RNF135Q8IUD6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
RNF135Q8IUD6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RNF135Q8IUD6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF135Q8IUD6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.34■■□□□ 1.33
RNF135Q8IUD6 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF135Q8IUD6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF135Q8IUD6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF135Q8IUD6 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.34■■□□□ 1.33
RNF135Q8IUD6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RNF135Q8IUD6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC23.34■■□□□ 1.33
RNF135Q8IUD6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
RNF135Q8IUD6 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF135Q8IUD6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.34■■□□□ 1.33
RNF135Q8IUD6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF135Q8IUD6 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.34■■□□□ 1.33
RNF135Q8IUD6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.34■■□□□ 1.33
RNF135Q8IUD6 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF135Q8IUD6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC23.33■■□□□ 1.33
RNF135Q8IUD6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
RNF135Q8IUD6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF135Q8IUD6 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.33■■□□□ 1.33
RNF135Q8IUD6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF135Q8IUD6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC23.33■■□□□ 1.33
RNF135Q8IUD6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RNF135Q8IUD6 CROCCP5-201ENST00000436658 830 ntBASIC23.33■■□□□ 1.33
RNF135Q8IUD6 CD99P1-205ENST00000527459 561 ntBASIC23.33■■□□□ 1.33
RNF135Q8IUD6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF135Q8IUD6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
RNF135Q8IUD6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
RNF135Q8IUD6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.33■■□□□ 1.32
RNF135Q8IUD6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF135Q8IUD6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RNF135Q8IUD6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.32■■□□□ 1.32
RNF135Q8IUD6 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.32■■□□□ 1.32
RNF135Q8IUD6 AP005435.1-201ENST00000529293 1178 ntBASIC23.32■■□□□ 1.32
RNF135Q8IUD6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC23.32■■□□□ 1.32
RNF135Q8IUD6 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF135Q8IUD6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF135Q8IUD6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RNF135Q8IUD6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.32■■□□□ 1.32
RNF135Q8IUD6 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RNF135Q8IUD6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF135Q8IUD6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF135Q8IUD6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.31■■□□□ 1.32
RNF135Q8IUD6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.31■■□□□ 1.32
RNF135Q8IUD6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.31■■□□□ 1.32
RNF135Q8IUD6 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.31■■□□□ 1.32
RNF135Q8IUD6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.31■■□□□ 1.32
RNF135Q8IUD6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC23.31■■□□□ 1.32
RNF135Q8IUD6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF135Q8IUD6 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.31■■□□□ 1.32
RNF135Q8IUD6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
RNF135Q8IUD6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RNF135Q8IUD6 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RNF135Q8IUD6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RNF135Q8IUD6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RNF135Q8IUD6 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF135Q8IUD6 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF135Q8IUD6 NCF1B-203ENST00000435988 1254 ntBASIC23.3■■□□□ 1.32
RNF135Q8IUD6 TSPY20P-201ENST00000450910 630 ntBASIC23.3■■□□□ 1.32
RNF135Q8IUD6 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.3■■□□□ 1.32
RNF135Q8IUD6 BID-214ENST00000617586 542 ntTSL 5 BASIC23.3■■□□□ 1.32
RNF135Q8IUD6 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC23.3■■□□□ 1.32
RNF135Q8IUD6 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
RNF135Q8IUD6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF135Q8IUD6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.3■■□□□ 1.32
RNF135Q8IUD6 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.3■■□□□ 1.32
RNF135Q8IUD6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RNF135Q8IUD6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF135Q8IUD6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF135Q8IUD6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF135Q8IUD6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF135Q8IUD6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
RNF135Q8IUD6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF135Q8IUD6 AC141586.4-201ENST00000624558 1573 ntBASIC23.29■■□□□ 1.32
RNF135Q8IUD6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
RNF135Q8IUD6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC23.29■■□□□ 1.32
RNF135Q8IUD6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RNF135Q8IUD6 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
RNF135Q8IUD6 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
RNF135Q8IUD6 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
RNF135Q8IUD6 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms