Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS36Q86VN1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
VPS36Q86VN1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
VPS36Q86VN1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
VPS36Q86VN1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS36Q86VN1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.7■■□□□ 1.39
VPS36Q86VN1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
VPS36Q86VN1 AC092028.1-203ENST00000608262 953 ntBASIC23.7■■□□□ 1.38
VPS36Q86VN1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS36Q86VN1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
VPS36Q86VN1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS36Q86VN1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
VPS36Q86VN1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS36Q86VN1 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS36Q86VN1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS36Q86VN1 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
VPS36Q86VN1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS36Q86VN1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS36Q86VN1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
VPS36Q86VN1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
VPS36Q86VN1 Z92544.1-202ENST00000571933 1220 ntBASIC23.69■■□□□ 1.38
VPS36Q86VN1 AC009086.3-201ENST00000623486 1008 ntBASIC23.69■■□□□ 1.38
VPS36Q86VN1 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC23.69■■□□□ 1.38
VPS36Q86VN1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS36Q86VN1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS36Q86VN1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
VPS36Q86VN1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
VPS36Q86VN1 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS36Q86VN1 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
VPS36Q86VN1 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.68■■□□□ 1.38
VPS36Q86VN1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
VPS36Q86VN1 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS36Q86VN1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
VPS36Q86VN1 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
VPS36Q86VN1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
VPS36Q86VN1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC23.68■■□□□ 1.38
VPS36Q86VN1 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS36Q86VN1 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.68■■□□□ 1.38
VPS36Q86VN1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS36Q86VN1 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS36Q86VN1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.68■■□□□ 1.38
VPS36Q86VN1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS36Q86VN1 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.67■■□□□ 1.38
VPS36Q86VN1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS36Q86VN1 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
VPS36Q86VN1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.67■■□□□ 1.38
VPS36Q86VN1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS36Q86VN1 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.67■■□□□ 1.38
VPS36Q86VN1 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
VPS36Q86VN1 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.67■■□□□ 1.38
VPS36Q86VN1 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
VPS36Q86VN1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.67■■□□□ 1.38
VPS36Q86VN1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS36Q86VN1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.66■■□□□ 1.38
VPS36Q86VN1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS36Q86VN1 AC092053.2-201ENST00000640557 1818 ntBASIC23.66■■□□□ 1.38
VPS36Q86VN1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS36Q86VN1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
VPS36Q86VN1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
VPS36Q86VN1 MTDHP2-201ENST00000601468 714 ntBASIC23.66■■□□□ 1.38
VPS36Q86VN1 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.66■■□□□ 1.38
VPS36Q86VN1 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS36Q86VN1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS36Q86VN1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.66■■□□□ 1.38
VPS36Q86VN1 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
VPS36Q86VN1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VPS36Q86VN1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS36Q86VN1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS36Q86VN1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS36Q86VN1 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS36Q86VN1 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
VPS36Q86VN1 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.65■■□□□ 1.38
VPS36Q86VN1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.65■■□□□ 1.38
VPS36Q86VN1 DUX4L4-201ENST00000566884 1269 ntBASIC23.65■■□□□ 1.38
VPS36Q86VN1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
VPS36Q86VN1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
VPS36Q86VN1 AC087742.1-201ENST00000575880 1738 ntBASIC23.64■■□□□ 1.38
VPS36Q86VN1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VPS36Q86VN1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VPS36Q86VN1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VPS36Q86VN1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
VPS36Q86VN1 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
VPS36Q86VN1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
VPS36Q86VN1 CLDN5-201ENST00000403084 2357 ntBASIC23.64■■□□□ 1.37
VPS36Q86VN1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
VPS36Q86VN1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
VPS36Q86VN1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.64■■□□□ 1.37
VPS36Q86VN1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
VPS36Q86VN1 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC23.63■■□□□ 1.37
VPS36Q86VN1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
VPS36Q86VN1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
VPS36Q86VN1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS36Q86VN1 AC137767.1-201ENST00000602918 1920 ntBASIC23.63■■□□□ 1.37
VPS36Q86VN1 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
VPS36Q86VN1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS36Q86VN1 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
VPS36Q86VN1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
VPS36Q86VN1 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.63■■□□□ 1.37
VPS36Q86VN1 AC139530.1-201ENST00000575312 1977 ntBASIC23.63■■□□□ 1.37
VPS36Q86VN1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms