Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
LRRTM1Q86UE6 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRTM1Q86UE6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LRRTM1Q86UE6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.14■□□□□ 0.65
LRRTM1Q86UE6 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LRRTM1Q86UE6 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRTM1Q86UE6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRTM1Q86UE6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRTM1Q86UE6 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LRRTM1Q86UE6 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRTM1Q86UE6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRTM1Q86UE6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.13■□□□□ 0.65
LRRTM1Q86UE6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRTM1Q86UE6 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LRRTM1Q86UE6 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
LRRTM1Q86UE6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
LRRTM1Q86UE6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM1Q86UE6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
LRRTM1Q86UE6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM1Q86UE6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM1Q86UE6 AC010542.4-201ENST00000563151 1910 ntBASIC19.12■□□□□ 0.65
LRRTM1Q86UE6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.12■□□□□ 0.65
LRRTM1Q86UE6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM1Q86UE6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM1Q86UE6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM1Q86UE6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM1Q86UE6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRTM1Q86UE6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRTM1Q86UE6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.12■□□□□ 0.65
LRRTM1Q86UE6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.12■□□□□ 0.65
LRRTM1Q86UE6 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LRRTM1Q86UE6 FAM99A-202ENST00000538190 1989 ntBASIC19.12■□□□□ 0.65
LRRTM1Q86UE6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LRRTM1Q86UE6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM1Q86UE6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM1Q86UE6 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRTM1Q86UE6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM1Q86UE6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM1Q86UE6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM1Q86UE6 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM1Q86UE6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM1Q86UE6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.11■□□□□ 0.65
LRRTM1Q86UE6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.11■□□□□ 0.65
LRRTM1Q86UE6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM1Q86UE6 PVT1_1.1-201ENST00000615125 194 ntBASIC19.11■□□□□ 0.65
LRRTM1Q86UE6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.11■□□□□ 0.65
LRRTM1Q86UE6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LRRTM1Q86UE6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LRRTM1Q86UE6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRTM1Q86UE6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRTM1Q86UE6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRTM1Q86UE6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRTM1Q86UE6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.09■□□□□ 0.65
LRRTM1Q86UE6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.09■□□□□ 0.65
LRRTM1Q86UE6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LRRTM1Q86UE6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRTM1Q86UE6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.09■□□□□ 0.65
LRRTM1Q86UE6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LRRTM1Q86UE6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRTM1Q86UE6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LRRTM1Q86UE6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LRRTM1Q86UE6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRTM1Q86UE6 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
LRRTM1Q86UE6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
LRRTM1Q86UE6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.08■□□□□ 0.64
LRRTM1Q86UE6 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LRRTM1Q86UE6 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM1Q86UE6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.07■□□□□ 0.64
LRRTM1Q86UE6 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM1Q86UE6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM1Q86UE6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.07■□□□□ 0.64
LRRTM1Q86UE6 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM1Q86UE6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM1Q86UE6 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM1Q86UE6 SNX5-217ENST00000606557 1087 ntBASIC19.07■□□□□ 0.64
LRRTM1Q86UE6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM1Q86UE6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM1Q86UE6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM1Q86UE6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRRTM1Q86UE6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRTM1Q86UE6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.06■□□□□ 0.64
LRRTM1Q86UE6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRTM1Q86UE6 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.06■□□□□ 0.64
LRRTM1Q86UE6 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms