Protein–RNA interactions for Protein: Q86UC2

RSPH3, Radial spoke head protein 3 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPH3Q86UC2 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RSPH3Q86UC2 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC24.37■■□□□ 1.49
RSPH3Q86UC2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RSPH3Q86UC2 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RSPH3Q86UC2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.37■■□□□ 1.49
RSPH3Q86UC2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.37■■□□□ 1.49
RSPH3Q86UC2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC24.37■■□□□ 1.49
RSPH3Q86UC2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC24.37■■□□□ 1.49
RSPH3Q86UC2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RSPH3Q86UC2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.37■■□□□ 1.49
RSPH3Q86UC2 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.37■■□□□ 1.49
RSPH3Q86UC2 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RSPH3Q86UC2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.37■■□□□ 1.49
RSPH3Q86UC2 AC068587.7-201ENST00000641602 218 ntBASIC24.37■■□□□ 1.49
RSPH3Q86UC2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.37■■□□□ 1.49
RSPH3Q86UC2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RSPH3Q86UC2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RSPH3Q86UC2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RSPH3Q86UC2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RSPH3Q86UC2 AC079630.1-202ENST00000618127 1840 ntBASIC24.36■■□□□ 1.49
RSPH3Q86UC2 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RSPH3Q86UC2 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC24.36■■□□□ 1.49
RSPH3Q86UC2 NTF6G-201ENST00000591094 616 ntBASIC24.36■■□□□ 1.49
RSPH3Q86UC2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RSPH3Q86UC2 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RSPH3Q86UC2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.34■■□□□ 1.49
RSPH3Q86UC2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RSPH3Q86UC2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RSPH3Q86UC2 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
RSPH3Q86UC2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RSPH3Q86UC2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.34■■□□□ 1.49
RSPH3Q86UC2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.34■■□□□ 1.49
RSPH3Q86UC2 RARRES2P11-201ENST00000635158 484 ntBASIC24.34■■□□□ 1.49
RSPH3Q86UC2 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
RSPH3Q86UC2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RSPH3Q86UC2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.34■■□□□ 1.49
RSPH3Q86UC2 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RSPH3Q86UC2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RSPH3Q86UC2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RSPH3Q86UC2 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RSPH3Q86UC2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RSPH3Q86UC2 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RSPH3Q86UC2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.33■■□□□ 1.49
RSPH3Q86UC2 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RSPH3Q86UC2 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RSPH3Q86UC2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
RSPH3Q86UC2 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RSPH3Q86UC2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RSPH3Q86UC2 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RSPH3Q86UC2 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.33■■□□□ 1.49
RSPH3Q86UC2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RSPH3Q86UC2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RSPH3Q86UC2 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RSPH3Q86UC2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RSPH3Q86UC2 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC24.33■■□□□ 1.49
RSPH3Q86UC2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
RSPH3Q86UC2 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
RSPH3Q86UC2 AC004687.1-201ENST00000579003 1625 ntBASIC24.32■■□□□ 1.48
RSPH3Q86UC2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC24.32■■□□□ 1.48
RSPH3Q86UC2 AC087239.1-201ENST00000622671 572 ntBASIC24.32■■□□□ 1.48
RSPH3Q86UC2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RSPH3Q86UC2 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
RSPH3Q86UC2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.32■■□□□ 1.48
RSPH3Q86UC2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.32■■□□□ 1.48
RSPH3Q86UC2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
RSPH3Q86UC2 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RSPH3Q86UC2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RSPH3Q86UC2 AC090192.1-201ENST00000517740 490 ntBASIC24.31■■□□□ 1.48
RSPH3Q86UC2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RSPH3Q86UC2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC24.31■■□□□ 1.48
RSPH3Q86UC2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.31■■□□□ 1.48
RSPH3Q86UC2 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC24.31■■□□□ 1.48
RSPH3Q86UC2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RSPH3Q86UC2 AC004812.2-201ENST00000611079 2094 ntBASIC24.31■■□□□ 1.48
RSPH3Q86UC2 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RSPH3Q86UC2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RSPH3Q86UC2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RSPH3Q86UC2 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RSPH3Q86UC2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.3■■□□□ 1.48
RSPH3Q86UC2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC24.3■■□□□ 1.48
RSPH3Q86UC2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC24.3■■□□□ 1.48
RSPH3Q86UC2 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.3■■□□□ 1.48
RSPH3Q86UC2 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.3■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms