Protein–RNA interactions for Protein: Q6PJQ5

FOXR2, Forkhead box protein R2, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2Q6PJQ5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
FOXR2Q6PJQ5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.16■■□□□ 1.46
FOXR2Q6PJQ5 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
FOXR2Q6PJQ5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
FOXR2Q6PJQ5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
FOXR2Q6PJQ5 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.15■■□□□ 1.46
FOXR2Q6PJQ5 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
FOXR2Q6PJQ5 MIR3621-201ENST00000580529 85 ntBASIC24.15■■□□□ 1.46
FOXR2Q6PJQ5 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
FOXR2Q6PJQ5 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC24.15■■□□□ 1.46
FOXR2Q6PJQ5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
FOXR2Q6PJQ5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC24.15■■□□□ 1.46
FOXR2Q6PJQ5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.46
FOXR2Q6PJQ5 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.14■■□□□ 1.46
FOXR2Q6PJQ5 AC004687.1-201ENST00000579003 1625 ntBASIC24.14■■□□□ 1.46
FOXR2Q6PJQ5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
FOXR2Q6PJQ5 AC137767.1-201ENST00000602918 1920 ntBASIC24.14■■□□□ 1.46
FOXR2Q6PJQ5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
FOXR2Q6PJQ5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
FOXR2Q6PJQ5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
FOXR2Q6PJQ5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
FOXR2Q6PJQ5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
FOXR2Q6PJQ5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
FOXR2Q6PJQ5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC24.14■■□□□ 1.45
FOXR2Q6PJQ5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.45
FOXR2Q6PJQ5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
FOXR2Q6PJQ5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
FOXR2Q6PJQ5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.13■■□□□ 1.45
FOXR2Q6PJQ5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.13■■□□□ 1.45
FOXR2Q6PJQ5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC24.13■■□□□ 1.45
FOXR2Q6PJQ5 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC24.13■■□□□ 1.45
FOXR2Q6PJQ5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
FOXR2Q6PJQ5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
FOXR2Q6PJQ5 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
FOXR2Q6PJQ5 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
FOXR2Q6PJQ5 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
FOXR2Q6PJQ5 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.12■■□□□ 1.45
FOXR2Q6PJQ5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC24.12■■□□□ 1.45
FOXR2Q6PJQ5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC24.12■■□□□ 1.45
FOXR2Q6PJQ5 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
FOXR2Q6PJQ5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
FOXR2Q6PJQ5 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
FOXR2Q6PJQ5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
FOXR2Q6PJQ5 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
FOXR2Q6PJQ5 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
FOXR2Q6PJQ5 STK25-234ENST00000535007 2459 ntTSL 2 BASIC24.11■■□□□ 1.45
FOXR2Q6PJQ5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
FOXR2Q6PJQ5 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
FOXR2Q6PJQ5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC24.11■■□□□ 1.45
FOXR2Q6PJQ5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
FOXR2Q6PJQ5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.11■■□□□ 1.45
FOXR2Q6PJQ5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
FOXR2Q6PJQ5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.11■■□□□ 1.45
FOXR2Q6PJQ5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
FOXR2Q6PJQ5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
FOXR2Q6PJQ5 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC24.11■■□□□ 1.45
FOXR2Q6PJQ5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
FOXR2Q6PJQ5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 LINC00565-201ENST00000562710 2331 ntBASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 AK3-203ENST00000447596 705 ntTSL 2 BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 AL356740.2-201ENST00000601559 647 ntBASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.1■■□□□ 1.45
FOXR2Q6PJQ5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
FOXR2Q6PJQ5 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.09■■□□□ 1.45
FOXR2Q6PJQ5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.09■■□□□ 1.45
FOXR2Q6PJQ5 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
FOXR2Q6PJQ5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.09■■□□□ 1.45
FOXR2Q6PJQ5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
FOXR2Q6PJQ5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
FOXR2Q6PJQ5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
FOXR2Q6PJQ5 C11orf96-202ENST00000528572 1834 ntBASIC24.09■■□□□ 1.45
FOXR2Q6PJQ5 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
FOXR2Q6PJQ5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
FOXR2Q6PJQ5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.09■■□□□ 1.45
FOXR2Q6PJQ5 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
FOXR2Q6PJQ5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
FOXR2Q6PJQ5 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
FOXR2Q6PJQ5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
FOXR2Q6PJQ5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
FOXR2Q6PJQ5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.08■■□□□ 1.45
FOXR2Q6PJQ5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.08■■□□□ 1.45
FOXR2Q6PJQ5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.08■■□□□ 1.45
FOXR2Q6PJQ5 AL031602.1-201ENST00000633169 911 ntBASIC24.08■■□□□ 1.45
FOXR2Q6PJQ5 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
FOXR2Q6PJQ5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms