Protein–RNA interactions for Protein: Q5RKV6

EXOSC6, Exosome complex component MTR3, humanhuman

Known RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC6Q5RKV6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
EXOSC6Q5RKV6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EXOSC6Q5RKV6 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
EXOSC6Q5RKV6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
EXOSC6Q5RKV6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EXOSC6Q5RKV6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.48■□□□□ 0.87
EXOSC6Q5RKV6 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EXOSC6Q5RKV6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.48■□□□□ 0.87
EXOSC6Q5RKV6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
EXOSC6Q5RKV6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.48■□□□□ 0.87
EXOSC6Q5RKV6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.48■□□□□ 0.87
EXOSC6Q5RKV6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
EXOSC6Q5RKV6 AC004687.1-201ENST00000579003 1625 ntBASIC20.48■□□□□ 0.87
EXOSC6Q5RKV6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
EXOSC6Q5RKV6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EXOSC6Q5RKV6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXOSC6Q5RKV6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
EXOSC6Q5RKV6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXOSC6Q5RKV6 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXOSC6Q5RKV6 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.47■□□□□ 0.87
EXOSC6Q5RKV6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
EXOSC6Q5RKV6 AC131281.2-201ENST00000520478 145 ntBASIC20.47■□□□□ 0.87
EXOSC6Q5RKV6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.47■□□□□ 0.87
EXOSC6Q5RKV6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
EXOSC6Q5RKV6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXOSC6Q5RKV6 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.47■□□□□ 0.87
EXOSC6Q5RKV6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
EXOSC6Q5RKV6 GUSBP5-202ENST00000510805 1989 ntBASIC20.46■□□□□ 0.87
EXOSC6Q5RKV6 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
EXOSC6Q5RKV6 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EXOSC6Q5RKV6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.46■□□□□ 0.87
EXOSC6Q5RKV6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EXOSC6Q5RKV6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.46■□□□□ 0.87
EXOSC6Q5RKV6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EXOSC6Q5RKV6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.46■□□□□ 0.87
EXOSC6Q5RKV6 ECEL1P1-201ENST00000373592 1742 ntBASIC20.46■□□□□ 0.87
EXOSC6Q5RKV6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
EXOSC6Q5RKV6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EXOSC6Q5RKV6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
EXOSC6Q5RKV6 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EXOSC6Q5RKV6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
EXOSC6Q5RKV6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.45■□□□□ 0.86
EXOSC6Q5RKV6 SRD5A1P1-201ENST00000442297 786 ntBASIC20.45■□□□□ 0.86
EXOSC6Q5RKV6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.45■□□□□ 0.86
EXOSC6Q5RKV6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
EXOSC6Q5RKV6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
EXOSC6Q5RKV6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
EXOSC6Q5RKV6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.44■□□□□ 0.86
EXOSC6Q5RKV6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
EXOSC6Q5RKV6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.44■□□□□ 0.86
EXOSC6Q5RKV6 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
EXOSC6Q5RKV6 MIR3181-201ENST00000578512 73 ntBASIC20.44■□□□□ 0.86
EXOSC6Q5RKV6 pRNA.6-201ENST00000610482 90 ntBASIC20.44■□□□□ 0.86
EXOSC6Q5RKV6 pRNA.5-201ENST00000612139 90 ntBASIC20.44■□□□□ 0.86
EXOSC6Q5RKV6 pRNA.11-201ENST00000618423 90 ntBASIC20.44■□□□□ 0.86
EXOSC6Q5RKV6 pRNA.13-201ENST00000619112 90 ntBASIC20.44■□□□□ 0.86
EXOSC6Q5RKV6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
EXOSC6Q5RKV6 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
EXOSC6Q5RKV6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
EXOSC6Q5RKV6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EXOSC6Q5RKV6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EXOSC6Q5RKV6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
EXOSC6Q5RKV6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.43■□□□□ 0.86
EXOSC6Q5RKV6 AC133637.1-201ENST00000624115 1537 ntBASIC20.43■□□□□ 0.86
EXOSC6Q5RKV6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
EXOSC6Q5RKV6 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
EXOSC6Q5RKV6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.43■□□□□ 0.86
EXOSC6Q5RKV6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.43■□□□□ 0.86
EXOSC6Q5RKV6 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.43■□□□□ 0.86
EXOSC6Q5RKV6 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
EXOSC6Q5RKV6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
EXOSC6Q5RKV6 AC079834.2-201ENST00000609776 1949 ntBASIC20.43■□□□□ 0.86
EXOSC6Q5RKV6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 CA15P2-201ENST00000611168 834 ntBASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
EXOSC6Q5RKV6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EXOSC6Q5RKV6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.41■□□□□ 0.86
EXOSC6Q5RKV6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EXOSC6Q5RKV6 LINC01960-201ENST00000563759 1884 ntBASIC20.41■□□□□ 0.86
EXOSC6Q5RKV6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
EXOSC6Q5RKV6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.41■□□□□ 0.86
EXOSC6Q5RKV6 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
EXOSC6Q5RKV6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
EXOSC6Q5RKV6 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms