Protein–RNA interactions for Protein: Q53EP0

FNDC3B, Fibronectin type III domain-containing protein 3B, humanhuman

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3BQ53EP0 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.4■■□□□ 1.18
FNDC3BQ53EP0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
FNDC3BQ53EP0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.4■■□□□ 1.18
FNDC3BQ53EP0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.4■■□□□ 1.18
FNDC3BQ53EP0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.4■■□□□ 1.18
FNDC3BQ53EP0 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.4■■□□□ 1.18
FNDC3BQ53EP0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
FNDC3BQ53EP0 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
FNDC3BQ53EP0 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
FNDC3BQ53EP0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC22.39■■□□□ 1.17
FNDC3BQ53EP0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC22.39■■□□□ 1.17
FNDC3BQ53EP0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.39■■□□□ 1.17
FNDC3BQ53EP0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.39■■□□□ 1.17
FNDC3BQ53EP0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC22.39■■□□□ 1.17
FNDC3BQ53EP0 AC105233.4-201ENST00000642045 216 ntBASIC22.39■■□□□ 1.17
FNDC3BQ53EP0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
FNDC3BQ53EP0 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
FNDC3BQ53EP0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
FNDC3BQ53EP0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
FNDC3BQ53EP0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.17
FNDC3BQ53EP0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
FNDC3BQ53EP0 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.38■■□□□ 1.17
FNDC3BQ53EP0 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FNDC3BQ53EP0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.38■■□□□ 1.17
FNDC3BQ53EP0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
FNDC3BQ53EP0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
FNDC3BQ53EP0 AC123595.1-201ENST00000440769 1046 ntBASIC22.38■■□□□ 1.17
FNDC3BQ53EP0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
FNDC3BQ53EP0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.38■■□□□ 1.17
FNDC3BQ53EP0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
FNDC3BQ53EP0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
FNDC3BQ53EP0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
FNDC3BQ53EP0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
FNDC3BQ53EP0 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.37■■□□□ 1.17
FNDC3BQ53EP0 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.37■■□□□ 1.17
FNDC3BQ53EP0 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC22.37■■□□□ 1.17
FNDC3BQ53EP0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.37■■□□□ 1.17
FNDC3BQ53EP0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.37■■□□□ 1.17
FNDC3BQ53EP0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
FNDC3BQ53EP0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
FNDC3BQ53EP0 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
FNDC3BQ53EP0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
FNDC3BQ53EP0 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
FNDC3BQ53EP0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
FNDC3BQ53EP0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
FNDC3BQ53EP0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC22.36■■□□□ 1.17
FNDC3BQ53EP0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
FNDC3BQ53EP0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.36■■□□□ 1.17
FNDC3BQ53EP0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
FNDC3BQ53EP0 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
FNDC3BQ53EP0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.35■■□□□ 1.17
FNDC3BQ53EP0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FNDC3BQ53EP0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FNDC3BQ53EP0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.35■■□□□ 1.17
FNDC3BQ53EP0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FNDC3BQ53EP0 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FNDC3BQ53EP0 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.35■■□□□ 1.17
FNDC3BQ53EP0 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.35■■□□□ 1.17
FNDC3BQ53EP0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
FNDC3BQ53EP0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.35■■□□□ 1.17
FNDC3BQ53EP0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.35■■□□□ 1.17
FNDC3BQ53EP0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
FNDC3BQ53EP0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
FNDC3BQ53EP0 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
FNDC3BQ53EP0 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.34■■□□□ 1.17
FNDC3BQ53EP0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FNDC3BQ53EP0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FNDC3BQ53EP0 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.34■■□□□ 1.17
FNDC3BQ53EP0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FNDC3BQ53EP0 NT5C3AP1-201ENST00000394500 1012 ntBASIC22.34■■□□□ 1.17
FNDC3BQ53EP0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.34■■□□□ 1.17
FNDC3BQ53EP0 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
FNDC3BQ53EP0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.34■■□□□ 1.17
FNDC3BQ53EP0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.34■■□□□ 1.17
FNDC3BQ53EP0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.34■■□□□ 1.17
FNDC3BQ53EP0 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
FNDC3BQ53EP0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.34■■□□□ 1.17
FNDC3BQ53EP0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
FNDC3BQ53EP0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
FNDC3BQ53EP0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 DUX4L2-201ENST00000561772 1275 ntBASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 AC087239.1-201ENST00000622671 572 ntBASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 DUX4L6-201ENST00000626483 1275 ntBASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 DUX4L1-201ENST00000627662 1275 ntBASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 DUX4L8-201ENST00000629013 1275 ntBASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 DUX4L3-201ENST00000630187 1275 ntBASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 DUX4L7-201ENST00000630678 1275 ntBASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 DUX4L5-201ENST00000630834 1275 ntBASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
FNDC3BQ53EP0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.33■■□□□ 1.16
FNDC3BQ53EP0 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.33■■□□□ 1.16
FNDC3BQ53EP0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
FNDC3BQ53EP0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.33■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms