Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRFAM7AQ494W8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRFAM7AQ494W8 EP400NL-214ENST00000641289 2402 ntBASIC19.17■□□□□ 0.66
CHRFAM7AQ494W8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.17■□□□□ 0.66
CHRFAM7AQ494W8 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRFAM7AQ494W8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRFAM7AQ494W8 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRFAM7AQ494W8 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRFAM7AQ494W8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 C1orf229-201ENST00000623686 2258 ntBASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.16■□□□□ 0.66
CHRFAM7AQ494W8 AF131216.4-201ENST00000638924 1588 ntBASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 MIR6722-201ENST00000617286 78 ntBASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CHRFAM7AQ494W8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CHRFAM7AQ494W8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHRFAM7AQ494W8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHRFAM7AQ494W8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CHRFAM7AQ494W8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRFAM7AQ494W8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHRFAM7AQ494W8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHRFAM7AQ494W8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRFAM7AQ494W8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.14■□□□□ 0.65
CHRFAM7AQ494W8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
CHRFAM7AQ494W8 MIR6821-201ENST00000617625 74 ntBASIC19.14■□□□□ 0.65
CHRFAM7AQ494W8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRFAM7AQ494W8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CHRFAM7AQ494W8 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CHRFAM7AQ494W8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRFAM7AQ494W8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRFAM7AQ494W8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.14■□□□□ 0.65
CHRFAM7AQ494W8 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CHRFAM7AQ494W8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.14■□□□□ 0.65
CHRFAM7AQ494W8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CHRFAM7AQ494W8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRFAM7AQ494W8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
CHRFAM7AQ494W8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRFAM7AQ494W8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.13■□□□□ 0.65
CHRFAM7AQ494W8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRFAM7AQ494W8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHRFAM7AQ494W8 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.13■□□□□ 0.65
CHRFAM7AQ494W8 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.13■□□□□ 0.65
CHRFAM7AQ494W8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CHRFAM7AQ494W8 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CHRFAM7AQ494W8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CHRFAM7AQ494W8 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHRFAM7AQ494W8 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.13■□□□□ 0.65
CHRFAM7AQ494W8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CHRFAM7AQ494W8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.13■□□□□ 0.65
CHRFAM7AQ494W8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CHRFAM7AQ494W8 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRFAM7AQ494W8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.12■□□□□ 0.65
CHRFAM7AQ494W8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRFAM7AQ494W8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRFAM7AQ494W8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRFAM7AQ494W8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.12■□□□□ 0.65
CHRFAM7AQ494W8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRFAM7AQ494W8 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRFAM7AQ494W8 AF213884.3-201ENST00000563833 479 ntBASIC19.12■□□□□ 0.65
CHRFAM7AQ494W8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRFAM7AQ494W8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CHRFAM7AQ494W8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRFAM7AQ494W8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHRFAM7AQ494W8 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHRFAM7AQ494W8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHRFAM7AQ494W8 LINC00565-201ENST00000562710 2331 ntBASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms