Protein–RNA interactions for Protein: Q3BBV0

NBPF1, Neuroblastoma breakpoint family member 1, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF1Q3BBV0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
NBPF1Q3BBV0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NBPF1Q3BBV0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
NBPF1Q3BBV0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC31.3■■■□□ 2.6
NBPF1Q3BBV0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC31.3■■■□□ 2.6
NBPF1Q3BBV0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
NBPF1Q3BBV0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NBPF1Q3BBV0 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
NBPF1Q3BBV0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
NBPF1Q3BBV0 AC012414.1-201ENST00000556676 535 ntBASIC31.29■■■□□ 2.6
NBPF1Q3BBV0 AC092666.2-201ENST00000613287 246 ntBASIC31.29■■■□□ 2.6
NBPF1Q3BBV0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC31.29■■■□□ 2.6
NBPF1Q3BBV0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC31.29■■■□□ 2.6
NBPF1Q3BBV0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC31.29■■■□□ 2.6
NBPF1Q3BBV0 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
NBPF1Q3BBV0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NBPF1Q3BBV0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
NBPF1Q3BBV0 NME4-202ENST00000382940 766 ntTSL 3 BASIC31.28■■■□□ 2.6
NBPF1Q3BBV0 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC31.28■■■□□ 2.6
NBPF1Q3BBV0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
NBPF1Q3BBV0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC31.28■■■□□ 2.6
NBPF1Q3BBV0 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
NBPF1Q3BBV0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC31.27■■■□□ 2.6
NBPF1Q3BBV0 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NBPF1Q3BBV0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
NBPF1Q3BBV0 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
NBPF1Q3BBV0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
NBPF1Q3BBV0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC31.27■■■□□ 2.6
NBPF1Q3BBV0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC31.27■■■□□ 2.6
NBPF1Q3BBV0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
NBPF1Q3BBV0 AC027612.3-201ENST00000413684 1047 ntBASIC31.26■■■□□ 2.59
NBPF1Q3BBV0 YBX1P1-201ENST00000445822 960 ntBASIC31.26■■■□□ 2.59
NBPF1Q3BBV0 AL358852.1-201ENST00000623174 1268 ntBASIC31.26■■■□□ 2.59
NBPF1Q3BBV0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC31.26■■■□□ 2.59
NBPF1Q3BBV0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NBPF1Q3BBV0 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
NBPF1Q3BBV0 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NBPF1Q3BBV0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC31.25■■■□□ 2.59
NBPF1Q3BBV0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NBPF1Q3BBV0 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC31.25■■■□□ 2.59
NBPF1Q3BBV0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
NBPF1Q3BBV0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
NBPF1Q3BBV0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
NBPF1Q3BBV0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
NBPF1Q3BBV0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC31.24■■■□□ 2.59
NBPF1Q3BBV0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC31.24■■■□□ 2.59
NBPF1Q3BBV0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC31.24■■■□□ 2.59
NBPF1Q3BBV0 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC31.24■■■□□ 2.59
NBPF1Q3BBV0 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC31.24■■■□□ 2.59
NBPF1Q3BBV0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
NBPF1Q3BBV0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
NBPF1Q3BBV0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NBPF1Q3BBV0 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
NBPF1Q3BBV0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC31.23■■■□□ 2.59
NBPF1Q3BBV0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC31.23■■■□□ 2.59
NBPF1Q3BBV0 DUX4L2-201ENST00000561772 1275 ntBASIC31.23■■■□□ 2.59
NBPF1Q3BBV0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC31.23■■■□□ 2.59
NBPF1Q3BBV0 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC31.23■■■□□ 2.59
NBPF1Q3BBV0 DUX4L6-201ENST00000626483 1275 ntBASIC31.23■■■□□ 2.59
NBPF1Q3BBV0 DUX4L1-201ENST00000627662 1275 ntBASIC31.23■■■□□ 2.59
NBPF1Q3BBV0 DUX4L8-201ENST00000629013 1275 ntBASIC31.23■■■□□ 2.59
NBPF1Q3BBV0 DUX4L3-201ENST00000630187 1275 ntBASIC31.23■■■□□ 2.59
NBPF1Q3BBV0 DUX4L7-201ENST00000630678 1275 ntBASIC31.23■■■□□ 2.59
NBPF1Q3BBV0 DUX4L5-201ENST00000630834 1275 ntBASIC31.23■■■□□ 2.59
NBPF1Q3BBV0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC31.22■■■□□ 2.59
NBPF1Q3BBV0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
NBPF1Q3BBV0 RARA-203ENST00000394086 2008 ntTSL 2 BASIC31.22■■■□□ 2.59
NBPF1Q3BBV0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
NBPF1Q3BBV0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC31.22■■■□□ 2.59
NBPF1Q3BBV0 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC31.22■■■□□ 2.59
NBPF1Q3BBV0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
NBPF1Q3BBV0 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC31.22■■■□□ 2.59
NBPF1Q3BBV0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC31.22■■■□□ 2.59
NBPF1Q3BBV0 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC31.22■■■□□ 2.59
NBPF1Q3BBV0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC31.22■■■□□ 2.59
NBPF1Q3BBV0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC31.22■■■□□ 2.59
NBPF1Q3BBV0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC31.22■■■□□ 2.59
NBPF1Q3BBV0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
NBPF1Q3BBV0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
NBPF1Q3BBV0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
NBPF1Q3BBV0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC31.21■■■□□ 2.59
NBPF1Q3BBV0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NBPF1Q3BBV0 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
NBPF1Q3BBV0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC31.21■■■□□ 2.59
NBPF1Q3BBV0 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
NBPF1Q3BBV0 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
NBPF1Q3BBV0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.59
NBPF1Q3BBV0 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
NBPF1Q3BBV0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC31.2■■■□□ 2.59
NBPF1Q3BBV0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC31.2■■■□□ 2.59
NBPF1Q3BBV0 AL354811.1-201ENST00000610286 706 ntBASIC31.2■■■□□ 2.59
NBPF1Q3BBV0 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
NBPF1Q3BBV0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC31.2■■■□□ 2.59
NBPF1Q3BBV0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
NBPF1Q3BBV0 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
NBPF1Q3BBV0 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
NBPF1Q3BBV0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC31.2■■■□□ 2.58
NBPF1Q3BBV0 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC31.2■■■□□ 2.58
NBPF1Q3BBV0 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
NBPF1Q3BBV0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms