Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PDS5AQ29RF7 AC034268.1-201ENST00000441047 882 ntBASIC26.68■■□□□ 1.86
PDS5AQ29RF7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC26.68■■□□□ 1.86
PDS5AQ29RF7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.68■■□□□ 1.86
PDS5AQ29RF7 MIR6084-201ENST00000622012 110 ntBASIC26.68■■□□□ 1.86
PDS5AQ29RF7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PDS5AQ29RF7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
PDS5AQ29RF7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PDS5AQ29RF7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PDS5AQ29RF7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC26.68■■□□□ 1.86
PDS5AQ29RF7 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.68■■□□□ 1.86
PDS5AQ29RF7 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PDS5AQ29RF7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PDS5AQ29RF7 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
PDS5AQ29RF7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC26.67■■□□□ 1.86
PDS5AQ29RF7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.67■■□□□ 1.86
PDS5AQ29RF7 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC26.67■■□□□ 1.86
PDS5AQ29RF7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PDS5AQ29RF7 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC26.67■■□□□ 1.86
PDS5AQ29RF7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
PDS5AQ29RF7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.67■■□□□ 1.86
PDS5AQ29RF7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PDS5AQ29RF7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.67■■□□□ 1.86
PDS5AQ29RF7 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
PDS5AQ29RF7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.66■■□□□ 1.86
PDS5AQ29RF7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PDS5AQ29RF7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.66■■□□□ 1.86
PDS5AQ29RF7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.66■■□□□ 1.86
PDS5AQ29RF7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PDS5AQ29RF7 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PDS5AQ29RF7 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PDS5AQ29RF7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PDS5AQ29RF7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 AC105233.4-201ENST00000642045 216 ntBASIC26.65■■□□□ 1.86
PDS5AQ29RF7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 DUX4L2-201ENST00000561772 1275 ntBASIC26.65■■□□□ 1.86
PDS5AQ29RF7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC26.65■■□□□ 1.86
PDS5AQ29RF7 DUX4L6-201ENST00000626483 1275 ntBASIC26.65■■□□□ 1.86
PDS5AQ29RF7 DUX4L1-201ENST00000627662 1275 ntBASIC26.65■■□□□ 1.86
PDS5AQ29RF7 DUX4L8-201ENST00000629013 1275 ntBASIC26.65■■□□□ 1.86
PDS5AQ29RF7 DUX4L3-201ENST00000630187 1275 ntBASIC26.65■■□□□ 1.86
PDS5AQ29RF7 DUX4L7-201ENST00000630678 1275 ntBASIC26.65■■□□□ 1.86
PDS5AQ29RF7 DUX4L5-201ENST00000630834 1275 ntBASIC26.65■■□□□ 1.86
PDS5AQ29RF7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC26.64■■□□□ 1.86
PDS5AQ29RF7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC26.64■■□□□ 1.86
PDS5AQ29RF7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
PDS5AQ29RF7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
PDS5AQ29RF7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC26.64■■□□□ 1.86
PDS5AQ29RF7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.64■■□□□ 1.85
PDS5AQ29RF7 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PDS5AQ29RF7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
PDS5AQ29RF7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
PDS5AQ29RF7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC26.64■■□□□ 1.85
PDS5AQ29RF7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC26.64■■□□□ 1.85
PDS5AQ29RF7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PDS5AQ29RF7 AC010141.3-201ENST00000456659 717 ntBASIC26.64■■□□□ 1.85
PDS5AQ29RF7 TERF1P2-201ENST00000583350 1212 ntBASIC26.64■■□□□ 1.85
PDS5AQ29RF7 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PDS5AQ29RF7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC26.63■■□□□ 1.85
PDS5AQ29RF7 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
PDS5AQ29RF7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PDS5AQ29RF7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PDS5AQ29RF7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.63■■□□□ 1.85
PDS5AQ29RF7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.63■■□□□ 1.85
PDS5AQ29RF7 PARL-206ENST00000435888 1098 ntTSL 5 BASIC26.63■■□□□ 1.85
PDS5AQ29RF7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PDS5AQ29RF7 AC087239.1-201ENST00000622671 572 ntBASIC26.63■■□□□ 1.85
PDS5AQ29RF7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.63■■□□□ 1.85
PDS5AQ29RF7 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PDS5AQ29RF7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.63■■□□□ 1.85
PDS5AQ29RF7 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PDS5AQ29RF7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC26.62■■□□□ 1.85
PDS5AQ29RF7 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC26.62■■□□□ 1.85
PDS5AQ29RF7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PDS5AQ29RF7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PDS5AQ29RF7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.62■■□□□ 1.85
PDS5AQ29RF7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
PDS5AQ29RF7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PDS5AQ29RF7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC26.62■■□□□ 1.85
PDS5AQ29RF7 AC092666.2-201ENST00000613287 246 ntBASIC26.62■■□□□ 1.85
PDS5AQ29RF7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC26.61■■□□□ 1.85
PDS5AQ29RF7 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PDS5AQ29RF7 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PDS5AQ29RF7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC26.61■■□□□ 1.85
PDS5AQ29RF7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PDS5AQ29RF7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms