Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RPP38P78345 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.8■□□□□ 0.92
RPP38P78345 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RPP38P78345 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPP38P78345 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPP38P78345 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPP38P78345 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.79■□□□□ 0.92
RPP38P78345 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPP38P78345 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RPP38P78345 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPP38P78345 SRD5A1P1-201ENST00000442297 786 ntBASIC20.79■□□□□ 0.92
RPP38P78345 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPP38P78345 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPP38P78345 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPP38P78345 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RPP38P78345 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPP38P78345 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RPP38P78345 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPP38P78345 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RPP38P78345 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.78■□□□□ 0.92
RPP38P78345 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RPP38P78345 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPP38P78345 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPP38P78345 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.78■□□□□ 0.92
RPP38P78345 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPP38P78345 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.78■□□□□ 0.92
RPP38P78345 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.78■□□□□ 0.92
RPP38P78345 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RPP38P78345 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
RPP38P78345 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPP38P78345 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPP38P78345 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RPP38P78345 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.78■□□□□ 0.92
RPP38P78345 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPP38P78345 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPP38P78345 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.77■□□□□ 0.92
RPP38P78345 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPP38P78345 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.77■□□□□ 0.92
RPP38P78345 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RPP38P78345 AL136116.3-201ENST00000402907 1138 ntBASIC20.77■□□□□ 0.92
RPP38P78345 AL512631.2-201ENST00000604634 923 ntBASIC20.77■□□□□ 0.92
RPP38P78345 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.77■□□□□ 0.92
RPP38P78345 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RPP38P78345 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.77■□□□□ 0.91
RPP38P78345 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RPP38P78345 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RPP38P78345 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPP38P78345 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPP38P78345 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
RPP38P78345 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.76■□□□□ 0.91
RPP38P78345 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPP38P78345 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RPP38P78345 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.76■□□□□ 0.91
RPP38P78345 AC092171.4-201ENST00000609130 632 ntBASIC20.76■□□□□ 0.91
RPP38P78345 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RPP38P78345 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RPP38P78345 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPP38P78345 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.75■□□□□ 0.91
RPP38P78345 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPP38P78345 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPP38P78345 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.75■□□□□ 0.91
RPP38P78345 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RPP38P78345 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RPP38P78345 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPP38P78345 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPP38P78345 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPP38P78345 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
RPP38P78345 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
RPP38P78345 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPP38P78345 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPP38P78345 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RPP38P78345 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
RPP38P78345 AC007375.3-201ENST00000600936 2314 ntBASIC20.74■□□□□ 0.91
RPP38P78345 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.74■□□□□ 0.91
RPP38P78345 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPP38P78345 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.74■□□□□ 0.91
RPP38P78345 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.74■□□□□ 0.91
RPP38P78345 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RPP38P78345 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
RPP38P78345 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RPP38P78345 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RPP38P78345 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
RPP38P78345 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.73■□□□□ 0.91
RPP38P78345 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPP38P78345 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RPP38P78345 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.73■□□□□ 0.91
RPP38P78345 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RPP38P78345 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.73■□□□□ 0.91
RPP38P78345 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
RPP38P78345 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RPP38P78345 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.73■□□□□ 0.91
RPP38P78345 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RPP38P78345 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.72■□□□□ 0.91
RPP38P78345 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPP38P78345 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
RPP38P78345 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPP38P78345 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RPP38P78345 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPP38P78345 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RPP38P78345 AC009102.2-201ENST00000606772 1639 ntBASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms