Protein–RNA interactions for Protein: P68366

TUBA4A, Tubulin alpha-4A chain, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4AP68366 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TUBA4AP68366 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TUBA4AP68366 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBA4AP68366 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBA4AP68366 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.61■□□□□ 0.89
TUBA4AP68366 AL592295.1-201ENST00000400984 884 ntBASIC20.61■□□□□ 0.89
TUBA4AP68366 AC103724.3-201ENST00000564481 992 ntBASIC20.61■□□□□ 0.89
TUBA4AP68366 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.61■□□□□ 0.89
TUBA4AP68366 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TUBA4AP68366 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBA4AP68366 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBA4AP68366 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.61■□□□□ 0.89
TUBA4AP68366 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TUBA4AP68366 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
TUBA4AP68366 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA4AP68366 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.6■□□□□ 0.89
TUBA4AP68366 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA4AP68366 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA4AP68366 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA4AP68366 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TUBA4AP68366 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA4AP68366 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.6■□□□□ 0.89
TUBA4AP68366 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TUBA4AP68366 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA4AP68366 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.6■□□□□ 0.89
TUBA4AP68366 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TUBA4AP68366 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBA4AP68366 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TUBA4AP68366 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.59■□□□□ 0.89
TUBA4AP68366 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.59■□□□□ 0.89
TUBA4AP68366 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBA4AP68366 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.59■□□□□ 0.89
TUBA4AP68366 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBA4AP68366 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBA4AP68366 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TUBA4AP68366 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.59■□□□□ 0.89
TUBA4AP68366 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.59■□□□□ 0.89
TUBA4AP68366 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.59■□□□□ 0.89
TUBA4AP68366 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBA4AP68366 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBA4AP68366 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TUBA4AP68366 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TUBA4AP68366 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TUBA4AP68366 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TUBA4AP68366 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TUBA4AP68366 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
TUBA4AP68366 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TUBA4AP68366 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TUBA4AP68366 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TUBA4AP68366 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
TUBA4AP68366 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TUBA4AP68366 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TUBA4AP68366 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
TUBA4AP68366 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.58■□□□□ 0.89
TUBA4AP68366 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TUBA4AP68366 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.58■□□□□ 0.88
TUBA4AP68366 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TUBA4AP68366 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.58■□□□□ 0.88
TUBA4AP68366 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TUBA4AP68366 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.58■□□□□ 0.88
TUBA4AP68366 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TUBA4AP68366 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TUBA4AP68366 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TUBA4AP68366 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TUBA4AP68366 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBA4AP68366 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TUBA4AP68366 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TUBA4AP68366 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.57■□□□□ 0.88
TUBA4AP68366 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.57■□□□□ 0.88
TUBA4AP68366 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.57■□□□□ 0.88
TUBA4AP68366 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBA4AP68366 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBA4AP68366 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.57■□□□□ 0.88
TUBA4AP68366 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TUBA4AP68366 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.56■□□□□ 0.88
TUBA4AP68366 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TUBA4AP68366 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBA4AP68366 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBA4AP68366 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.56■□□□□ 0.88
TUBA4AP68366 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TUBA4AP68366 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.56■□□□□ 0.88
TUBA4AP68366 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TUBA4AP68366 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBA4AP68366 AL451085.2-201ENST00000605085 799 ntBASIC20.56■□□□□ 0.88
TUBA4AP68366 AL031848.2-201ENST00000607670 837 ntBASIC20.56■□□□□ 0.88
TUBA4AP68366 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TUBA4AP68366 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.56■□□□□ 0.88
TUBA4AP68366 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TUBA4AP68366 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.56■□□□□ 0.88
TUBA4AP68366 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TUBA4AP68366 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBA4AP68366 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TUBA4AP68366 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TUBA4AP68366 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBA4AP68366 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TUBA4AP68366 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBA4AP68366 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TUBA4AP68366 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBA4AP68366 AC022616.5-201ENST00000518796 181 ntBASIC20.55■□□□□ 0.88
TUBA4AP68366 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms