Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.93■□□□□ 0.94
SKP1P63208 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.93■□□□□ 0.94
SKP1P63208 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.93■□□□□ 0.94
SKP1P63208 AC068587.7-201ENST00000641602 218 ntBASIC20.93■□□□□ 0.94
SKP1P63208 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SKP1P63208 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
SKP1P63208 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.93■□□□□ 0.94
SKP1P63208 AC004687.1-201ENST00000579003 1625 ntBASIC20.93■□□□□ 0.94
SKP1P63208 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SKP1P63208 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SKP1P63208 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SKP1P63208 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SKP1P63208 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.92■□□□□ 0.94
SKP1P63208 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SKP1P63208 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SKP1P63208 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
SKP1P63208 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
SKP1P63208 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SKP1P63208 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SKP1P63208 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
SKP1P63208 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.91■□□□□ 0.94
SKP1P63208 MIR638-201ENST00000385237 100 ntBASIC20.91■□□□□ 0.94
SKP1P63208 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SKP1P63208 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SKP1P63208 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.91■□□□□ 0.94
SKP1P63208 AC233992.3-201ENST00000607491 485 ntBASIC20.91■□□□□ 0.94
SKP1P63208 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SKP1P63208 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SKP1P63208 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SKP1P63208 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SKP1P63208 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SKP1P63208 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.9■□□□□ 0.94
SKP1P63208 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SKP1P63208 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.9■□□□□ 0.94
SKP1P63208 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.9■□□□□ 0.94
SKP1P63208 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SKP1P63208 AC142381.2-201ENST00000566120 298 ntBASIC20.9■□□□□ 0.94
SKP1P63208 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
SKP1P63208 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SKP1P63208 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SKP1P63208 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SKP1P63208 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SKP1P63208 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SKP1P63208 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SKP1P63208 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SKP1P63208 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.89■□□□□ 0.93
SKP1P63208 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SKP1P63208 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SKP1P63208 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.89■□□□□ 0.93
SKP1P63208 AC091305.1-201ENST00000479476 895 ntBASIC20.89■□□□□ 0.93
SKP1P63208 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SKP1P63208 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.89■□□□□ 0.93
SKP1P63208 AC005837.3-201ENST00000612163 286 ntBASIC20.89■□□□□ 0.93
SKP1P63208 AC087239.1-201ENST00000622671 572 ntBASIC20.89■□□□□ 0.93
SKP1P63208 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.89■□□□□ 0.93
SKP1P63208 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SKP1P63208 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SKP1P63208 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SKP1P63208 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SKP1P63208 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.88■□□□□ 0.93
SKP1P63208 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SKP1P63208 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SKP1P63208 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.88■□□□□ 0.93
SKP1P63208 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SKP1P63208 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SKP1P63208 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.87■□□□□ 0.93
SKP1P63208 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SKP1P63208 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.87■□□□□ 0.93
SKP1P63208 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SKP1P63208 AP001330.3-201ENST00000520123 633 ntBASIC20.87■□□□□ 0.93
SKP1P63208 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SKP1P63208 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.87■□□□□ 0.93
SKP1P63208 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.87■□□□□ 0.93
SKP1P63208 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.87■□□□□ 0.93
SKP1P63208 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SKP1P63208 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.87■□□□□ 0.93
SKP1P63208 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SKP1P63208 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SKP1P63208 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SKP1P63208 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SKP1P63208 RASA4CP-201ENST00000424092 1398 ntBASIC20.86■□□□□ 0.93
SKP1P63208 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SKP1P63208 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SKP1P63208 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SKP1P63208 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SKP1P63208 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.86■□□□□ 0.93
SKP1P63208 SLC47A1P1-202ENST00000449666 945 ntBASIC20.86■□□□□ 0.93
SKP1P63208 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.86■□□□□ 0.93
SKP1P63208 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.86■□□□□ 0.93
SKP1P63208 AF213884.3-201ENST00000563833 479 ntBASIC20.86■□□□□ 0.93
SKP1P63208 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SKP1P63208 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.86■□□□□ 0.93
SKP1P63208 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SKP1P63208 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SKP1P63208 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SKP1P63208 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SKP1P63208 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SKP1P63208 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.86■□□□□ 0.93
SKP1P63208 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SKP1P63208 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms