Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
UBA52P62987 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBA52P62987 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.87■□□□□ 0.61
UBA52P62987 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBA52P62987 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBA52P62987 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBA52P62987 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
UBA52P62987 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.87■□□□□ 0.61
UBA52P62987 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.87■□□□□ 0.61
UBA52P62987 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
UBA52P62987 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBA52P62987 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBA52P62987 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBA52P62987 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBA52P62987 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
UBA52P62987 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBA52P62987 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBA52P62987 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.86■□□□□ 0.61
UBA52P62987 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.86■□□□□ 0.61
UBA52P62987 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.86■□□□□ 0.61
UBA52P62987 MIR6089-201ENST00000616698 64 ntBASIC18.86■□□□□ 0.61
UBA52P62987 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBA52P62987 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBA52P62987 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBA52P62987 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBA52P62987 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
UBA52P62987 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBA52P62987 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
UBA52P62987 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBA52P62987 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
UBA52P62987 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
UBA52P62987 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBA52P62987 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.85■□□□□ 0.61
UBA52P62987 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBA52P62987 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBA52P62987 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.85■□□□□ 0.61
UBA52P62987 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBA52P62987 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBA52P62987 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBA52P62987 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
UBA52P62987 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBA52P62987 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
UBA52P62987 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.84■□□□□ 0.61
UBA52P62987 AL512631.2-201ENST00000604634 923 ntBASIC18.84■□□□□ 0.61
UBA52P62987 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
UBA52P62987 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
UBA52P62987 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.84■□□□□ 0.61
UBA52P62987 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBA52P62987 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBA52P62987 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBA52P62987 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
UBA52P62987 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.83■□□□□ 0.6
UBA52P62987 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.83■□□□□ 0.6
UBA52P62987 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBA52P62987 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
UBA52P62987 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
UBA52P62987 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.83■□□□□ 0.6
UBA52P62987 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBA52P62987 LSR-205ENST00000427250 1606 ntTSL 2 BASIC18.82■□□□□ 0.6
UBA52P62987 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBA52P62987 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBA52P62987 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UBA52P62987 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBA52P62987 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBA52P62987 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBA52P62987 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.82■□□□□ 0.6
UBA52P62987 AC133561.4-201ENST00000566112 224 ntBASIC18.82■□□□□ 0.6
UBA52P62987 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.82■□□□□ 0.6
UBA52P62987 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
UBA52P62987 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UBA52P62987 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UBA52P62987 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBA52P62987 ANOS2P-203ENST00000472227 1816 ntBASIC18.81■□□□□ 0.6
UBA52P62987 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBA52P62987 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UBA52P62987 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
UBA52P62987 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UBA52P62987 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.81■□□□□ 0.6
UBA52P62987 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBA52P62987 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.81■□□□□ 0.6
UBA52P62987 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.81■□□□□ 0.6
UBA52P62987 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBA52P62987 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.81■□□□□ 0.6
UBA52P62987 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBA52P62987 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.81■□□□□ 0.6
UBA52P62987 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.81■□□□□ 0.6
UBA52P62987 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.81■□□□□ 0.6
UBA52P62987 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.81■□□□□ 0.6
UBA52P62987 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBA52P62987 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBA52P62987 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBA52P62987 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UBA52P62987 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UBA52P62987 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.81■□□□□ 0.6
UBA52P62987 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.81■□□□□ 0.6
UBA52P62987 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UBA52P62987 AF131216.4-201ENST00000638924 1588 ntBASIC18.81■□□□□ 0.6
UBA52P62987 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBA52P62987 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UBA52P62987 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms