Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS27AP62979 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS27AP62979 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS27AP62979 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RPS27AP62979 AC004987.1-201ENST00000428627 508 ntBASIC18.94■□□□□ 0.62
RPS27AP62979 ATP5G2P3-201ENST00000429083 425 ntBASIC18.94■□□□□ 0.62
RPS27AP62979 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.94■□□□□ 0.62
RPS27AP62979 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.94■□□□□ 0.62
RPS27AP62979 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS27AP62979 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RPS27AP62979 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS27AP62979 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPS27AP62979 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS27AP62979 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPS27AP62979 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPS27AP62979 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS27AP62979 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RPS27AP62979 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.93■□□□□ 0.62
RPS27AP62979 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RPS27AP62979 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS27AP62979 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.93■□□□□ 0.62
RPS27AP62979 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS27AP62979 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS27AP62979 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
RPS27AP62979 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS27AP62979 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS27AP62979 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.93■□□□□ 0.62
RPS27AP62979 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RPS27AP62979 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.93■□□□□ 0.62
RPS27AP62979 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS27AP62979 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS27AP62979 AC139530.1-201ENST00000575312 1977 ntBASIC18.93■□□□□ 0.62
RPS27AP62979 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RPS27AP62979 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
RPS27AP62979 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.93■□□□□ 0.62
RPS27AP62979 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RPS27AP62979 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.93■□□□□ 0.62
RPS27AP62979 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS27AP62979 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RPS27AP62979 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS27AP62979 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RPS27AP62979 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS27AP62979 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS27AP62979 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS27AP62979 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.92■□□□□ 0.62
RPS27AP62979 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.92■□□□□ 0.62
RPS27AP62979 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RPS27AP62979 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.91■□□□□ 0.62
RPS27AP62979 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS27AP62979 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS27AP62979 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS27AP62979 AC092053.2-201ENST00000640557 1818 ntBASIC18.91■□□□□ 0.62
RPS27AP62979 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RPS27AP62979 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.91■□□□□ 0.62
RPS27AP62979 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS27AP62979 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS27AP62979 AC010980.1-201ENST00000587192 1142 ntBASIC18.91■□□□□ 0.62
RPS27AP62979 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RPS27AP62979 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RPS27AP62979 AC144652.1-201ENST00000609974 1624 ntBASIC18.91■□□□□ 0.62
RPS27AP62979 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.9■□□□□ 0.62
RPS27AP62979 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS27AP62979 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
RPS27AP62979 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.9■□□□□ 0.62
RPS27AP62979 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RPS27AP62979 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS27AP62979 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.9■□□□□ 0.62
RPS27AP62979 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.9■□□□□ 0.62
RPS27AP62979 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.9■□□□□ 0.62
RPS27AP62979 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RPS27AP62979 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RPS27AP62979 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS27AP62979 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.9■□□□□ 0.62
RPS27AP62979 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.9■□□□□ 0.62
RPS27AP62979 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.9■□□□□ 0.62
RPS27AP62979 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RPS27AP62979 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS27AP62979 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RPS27AP62979 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.9■□□□□ 0.62
RPS27AP62979 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RPS27AP62979 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
RPS27AP62979 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS27AP62979 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RPS27AP62979 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS27AP62979 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPS27AP62979 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RPS27AP62979 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS27AP62979 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC18.89■□□□□ 0.61
RPS27AP62979 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.89■□□□□ 0.61
RPS27AP62979 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.89■□□□□ 0.61
RPS27AP62979 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS27AP62979 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RPS27AP62979 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS27AP62979 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.88■□□□□ 0.61
RPS27AP62979 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.88■□□□□ 0.61
RPS27AP62979 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RPS27AP62979 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS27AP62979 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RPS27AP62979 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.88■□□□□ 0.61
RPS27AP62979 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms