Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 TEL1YBL088C 8364 nt3.96□□□□□ -1.78
YNL040WP53960 COS4YFL062W 1140 nt3.96□□□□□ -1.78
YNL040WP53960 MRS3YJL133W 945 nt3.96□□□□□ -1.78
YNL040WP53960 PRM9YAR031W 897 nt3.96□□□□□ -1.78
YNL040WP53960 COS3YML132W 1140 nt3.96□□□□□ -1.78
YNL040WP53960 COS2YBR302C 1140 nt3.96□□□□□ -1.78
YNL040WP53960 GAS5YOL030W 1455 nt3.96□□□□□ -1.78
YNL040WP53960 ATG32YIL146C 1590 nt3.96□□□□□ -1.78
YNL040WP53960 FMP25YLR077W 1752 nt3.96□□□□□ -1.78
YNL040WP53960 DEG1YFL001W 1329 nt3.95□□□□□ -1.78
YNL040WP53960 APM1YPL259C 1428 nt3.95□□□□□ -1.78
YNL040WP53960 FAT1YBR041W 2010 nt3.95□□□□□ -1.78
YNL040WP53960 RGP1YDR137W 1992 nt3.95□□□□□ -1.78
YNL040WP53960 SET4YJL105W 1683 nt3.95□□□□□ -1.78
YNL040WP53960 KIN28YDL108W 921 nt3.95□□□□□ -1.78
YNL040WP53960 AIR1YIL079C 1083 nt3.95□□□□□ -1.78
YNL040WP53960 TPP1YMR156C 717 nt3.95□□□□□ -1.78
YNL040WP53960 COA2YPL189C-A 207 nt3.95□□□□□ -1.78
YNL040WP53960 NRG2YBR066C 663 nt3.95□□□□□ -1.78
YNL040WP53960 PFK1YGR240C 2964 nt3.95□□□□□ -1.78
YNL040WP53960 CDC9YDL164C 2268 nt3.95□□□□□ -1.78
YNL040WP53960 OAF1YAL051W 3144 nt3.95□□□□□ -1.78
YNL040WP53960 POL12YBL035C 2118 nt3.94□□□□□ -1.78
YNL040WP53960 NVJ1YHR195W 966 nt3.94□□□□□ -1.78
YNL040WP53960 RPB3YIL021W 957 nt3.94□□□□□ -1.78
YNL040WP53960 YLR124WYLR124W 345 nt3.94□□□□□ -1.78
YNL040WP53960 FLD1YLR404W 858 nt3.94□□□□□ -1.78
YNL040WP53960 YPL073CYPL073C 486 nt3.94□□□□□ -1.78
YNL040WP53960 ISA2YPR067W 558 nt3.94□□□□□ -1.78
YNL040WP53960 TRS120YDR407C 3870 nt3.94□□□□□ -1.78
YNL040WP53960 FKH1YIL131C 1455 nt3.93□□□□□ -1.78
YNL040WP53960 VPS36YLR417W 1701 nt3.93□□□□□ -1.78
YNL040WP53960 YSH1YLR277C 2340 nt3.93□□□□□ -1.78
YNL040WP53960 SSU1YPL092W 1377 nt3.93□□□□□ -1.78
YNL040WP53960 CNN1YFR046C 1086 nt3.93□□□□□ -1.78
YNL040WP53960 REC104YHR157W 549 nt3.93□□□□□ -1.78
YNL040WP53960 YHR173CYHR173C 339 nt3.93□□□□□ -1.78
YNL040WP53960 BNA1YJR025C 534 nt3.93□□□□□ -1.78
YNL040WP53960 ELF1YKL160W 438 nt3.93□□□□□ -1.78
YNL040WP53960 YBR141W-AYBR141W-A 96 nt3.93□□□□□ -1.78
YNL040WP53960 DHH1YDL160C 1521 nt3.93□□□□□ -1.78
YNL040WP53960 TRK1YJL129C 3708 nt3.93□□□□□ -1.78
YNL040WP53960 GAS4YOL132W 1416 nt3.93□□□□□ -1.78
YNL040WP53960 AIM21YIR003W 2040 nt3.92□□□□□ -1.78
YNL040WP53960 LTV1YKL143W 1392 nt3.92□□□□□ -1.78
YNL040WP53960 YGL140CYGL140C 3660 nt3.92□□□□□ -1.78
YNL040WP53960 GAS2YLR343W 1668 nt3.92□□□□□ -1.78
YNL040WP53960 IMG2YCR071C 441 nt3.92□□□□□ -1.78
YNL040WP53960 MRPL7YDR237W 879 nt3.92□□□□□ -1.78
YNL040WP53960 MSW1YDR268W 1140 nt3.92□□□□□ -1.78
YNL040WP53960 YGL262WYGL262W 528 nt3.92□□□□□ -1.78
YNL040WP53960 YIL163CYIL163C 354 nt3.92□□□□□ -1.78
YNL040WP53960 CYC1YJR048W 330 nt3.92□□□□□ -1.78
YNL040WP53960 SRN2YLR119W 642 nt3.92□□□□□ -1.78
YNL040WP53960 IDP2YLR174W 1239 nt3.92□□□□□ -1.78
YNL040WP53960 PNG1YPL096W 1092 nt3.92□□□□□ -1.78
YNL040WP53960 NOG1YPL093W 1944 nt3.91□□□□□ -1.78
YNL040WP53960 PRP19YLL036C 1512 nt3.91□□□□□ -1.78
YNL040WP53960 YOR022CYOR022C 2148 nt3.91□□□□□ -1.78
YNL040WP53960 YCR085WYCR085W 354 nt3.91□□□□□ -1.78
YNL040WP53960 CWC2YDL209C 1020 nt3.91□□□□□ -1.78
YNL040WP53960 RRP1YDR087C 837 nt3.91□□□□□ -1.78
YNL040WP53960 CPR1YDR155C 489 nt3.91□□□□□ -1.78
YNL040WP53960 HOM2YDR158W 1098 nt3.91□□□□□ -1.78
YNL040WP53960 HOM3YER052C 1584 nt3.91□□□□□ -1.78
YNL040WP53960 POP3YNL282W 588 nt3.91□□□□□ -1.78
YNL040WP53960 YOR034C-AYOR034C-A 243 nt3.91□□□□□ -1.78
YNL040WP53960 ABP140YOR239W 1887 nt3.91□□□□□ -1.78
YNL040WP53960 MCM7YBR202W 2538 nt3.91□□□□□ -1.78
YNL040WP53960 ERG5YMR015C 1617 nt3.91□□□□□ -1.78
YNL040WP53960 APE2YKL157W 2859 nt3.9□□□□□ -1.78
YNL040WP53960 YJR096WYJR096W 849 nt3.9□□□□□ -1.79
YNL040WP53960 BAT2YJR148W 1131 nt3.9□□□□□ -1.79
YNL040WP53960 ASI2YNL159C 870 nt3.9□□□□□ -1.79
YNL040WP53960 FYV5YCL058C 459 nt3.9□□□□□ -1.79
YNL040WP53960 EXO70YJL085W 1872 nt3.9□□□□□ -1.79
YNL040WP53960 RPO31YOR116C 4383 nt3.89□□□□□ -1.79
YNL040WP53960 PHO12YHR215W 1404 nt3.89□□□□□ -1.79
YNL040WP53960 PHO11YAR071W 1404 nt3.89□□□□□ -1.79
YNL040WP53960 IOC2YLR095C 2439 nt3.89□□□□□ -1.79
YNL040WP53960 FAD1YDL045C 921 nt3.89□□□□□ -1.79
YNL040WP53960 DCV1YFR012W 609 nt3.89□□□□□ -1.79
YNL040WP53960 COQ5YML110C 924 nt3.89□□□□□ -1.79
YNL040WP53960 REX4YOL080C 870 nt3.89□□□□□ -1.79
YNL040WP53960 HCA4YJL033W 2313 nt3.88□□□□□ -1.79
YNL040WP53960 GGA1YDR358W 1674 nt3.88□□□□□ -1.79
YNL040WP53960 RPP1AYDL081C 321 nt3.88□□□□□ -1.79
YNL040WP53960 SEC53YFL045C 765 nt3.88□□□□□ -1.79
YNL040WP53960 SNO1YMR095C 675 nt3.88□□□□□ -1.79
YNL040WP53960 RAD17YOR368W 1206 nt3.88□□□□□ -1.79
YNL040WP53960 YPL162CYPL162C 822 nt3.88□□□□□ -1.79
YNL040WP53960 GCN5YGR252W 1320 nt3.88□□□□□ -1.79
YNL040WP53960 SPT6YGR116W 4356 nt3.88□□□□□ -1.79
YNL040WP53960 SSL1YLR005W 1386 nt3.88□□□□□ -1.79
YNL040WP53960 OSH3YHR073W 2991 nt3.87□□□□□ -1.79
YNL040WP53960 SNT1YCR033W 3681 nt3.87□□□□□ -1.79
YNL040WP53960 TAF7YMR227C 1773 nt3.87□□□□□ -1.79
YNL040WP53960 AIP1YMR092C 1848 nt3.87□□□□□ -1.79
YNL040WP53960 DAS2YDR020C 699 nt3.87□□□□□ -1.79
YNL040WP53960 RPS13YDR064W 456 nt3.87□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms