Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC32.07■■■□□ 2.73
CLTCL1P53675 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
CLTCL1P53675 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
CLTCL1P53675 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
CLTCL1P53675 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC32.07■■■□□ 2.72
CLTCL1P53675 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC32.07■■■□□ 2.72
CLTCL1P53675 LINC02228-203ENST00000641970 1355 ntBASIC32.06■■■□□ 2.72
CLTCL1P53675 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC32.06■■■□□ 2.72
CLTCL1P53675 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CLTCL1P53675 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
CLTCL1P53675 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
CLTCL1P53675 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC32.05■■■□□ 2.72
CLTCL1P53675 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
CLTCL1P53675 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC32.05■■■□□ 2.72
CLTCL1P53675 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC32.05■■■□□ 2.72
CLTCL1P53675 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC32.05■■■□□ 2.72
CLTCL1P53675 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC32.05■■■□□ 2.72
CLTCL1P53675 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CLTCL1P53675 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CLTCL1P53675 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC32.04■■■□□ 2.72
CLTCL1P53675 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC32.04■■■□□ 2.72
CLTCL1P53675 VPS53-216ENST00000574029 585 ntTSL 4 BASIC32.04■■■□□ 2.72
CLTCL1P53675 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CLTCL1P53675 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CLTCL1P53675 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CLTCL1P53675 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC32.04■■■□□ 2.72
CLTCL1P53675 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC32.04■■■□□ 2.72
CLTCL1P53675 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
CLTCL1P53675 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
CLTCL1P53675 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC32.04■■■□□ 2.72
CLTCL1P53675 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC32.04■■■□□ 2.72
CLTCL1P53675 RARA-203ENST00000394086 2008 ntTSL 2 BASIC32.03■■■□□ 2.72
CLTCL1P53675 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC32.03■■■□□ 2.72
CLTCL1P53675 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CLTCL1P53675 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC32.03■■■□□ 2.72
CLTCL1P53675 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CLTCL1P53675 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
CLTCL1P53675 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
CLTCL1P53675 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC32.03■■■□□ 2.72
CLTCL1P53675 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC32.02■■■□□ 2.72
CLTCL1P53675 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC32.02■■■□□ 2.72
CLTCL1P53675 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC32.02■■■□□ 2.72
CLTCL1P53675 NTF6G-201ENST00000591094 616 ntBASIC32.02■■■□□ 2.72
CLTCL1P53675 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
CLTCL1P53675 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CLTCL1P53675 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CLTCL1P53675 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CLTCL1P53675 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
CLTCL1P53675 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC32.01■■■□□ 2.72
CLTCL1P53675 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC32.01■■■□□ 2.72
CLTCL1P53675 ABCB10P4-201ENST00000566803 2184 ntBASIC32.01■■■□□ 2.72
CLTCL1P53675 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC32.01■■■□□ 2.72
CLTCL1P53675 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC32.01■■■□□ 2.72
CLTCL1P53675 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC32.01■■■□□ 2.72
CLTCL1P53675 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.71
CLTCL1P53675 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC32.01■■■□□ 2.71
CLTCL1P53675 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CLTCL1P53675 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC32■■■□□ 2.71
CLTCL1P53675 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC32■■■□□ 2.71
CLTCL1P53675 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC32■■■□□ 2.71
CLTCL1P53675 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC32■■■□□ 2.71
CLTCL1P53675 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC32■■■□□ 2.71
CLTCL1P53675 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC32■■■□□ 2.71
CLTCL1P53675 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CLTCL1P53675 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CLTCL1P53675 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC32■■■□□ 2.71
CLTCL1P53675 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
CLTCL1P53675 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
CLTCL1P53675 PREB-202ENST00000406567 1910 ntTSL 5 BASIC31.99■■■□□ 2.71
CLTCL1P53675 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CLTCL1P53675 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
CLTCL1P53675 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC31.99■■■□□ 2.71
CLTCL1P53675 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC31.99■■■□□ 2.71
CLTCL1P53675 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC31.99■■■□□ 2.71
CLTCL1P53675 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC31.99■■■□□ 2.71
CLTCL1P53675 EI24-211ENST00000534546 1544 ntTSL 2 BASIC31.99■■■□□ 2.71
CLTCL1P53675 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC31.99■■■□□ 2.71
CLTCL1P53675 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC31.98■■■□□ 2.71
CLTCL1P53675 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CLTCL1P53675 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC31.98■■■□□ 2.71
CLTCL1P53675 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
CLTCL1P53675 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
CLTCL1P53675 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC31.98■■■□□ 2.71
CLTCL1P53675 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC31.97■■■□□ 2.71
CLTCL1P53675 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC31.97■■■□□ 2.71
CLTCL1P53675 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC31.97■■■□□ 2.71
CLTCL1P53675 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC31.97■■■□□ 2.71
CLTCL1P53675 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC31.97■■■□□ 2.71
CLTCL1P53675 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC31.97■■■□□ 2.71
CLTCL1P53675 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CLTCL1P53675 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CLTCL1P53675 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CLTCL1P53675 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
CLTCL1P53675 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.96■■■□□ 2.71
CLTCL1P53675 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CLTCL1P53675 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
CLTCL1P53675 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC31.95■■■□□ 2.71
CLTCL1P53675 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC31.95■■■□□ 2.7
CLTCL1P53675 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC31.94■■■□□ 2.7
CLTCL1P53675 AC006015.1-201ENST00000429970 570 ntBASIC31.94■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms