Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.56■□□□□ 0.88
SMSP52788 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMSP52788 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.56■□□□□ 0.88
SMSP52788 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMSP52788 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMSP52788 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.56■□□□□ 0.88
SMSP52788 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.56■□□□□ 0.88
SMSP52788 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.56■□□□□ 0.88
SMSP52788 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SMSP52788 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SMSP52788 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SMSP52788 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMSP52788 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMSP52788 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.55■□□□□ 0.88
SMSP52788 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMSP52788 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
SMSP52788 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMSP52788 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMSP52788 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMSP52788 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMSP52788 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SMSP52788 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.55■□□□□ 0.88
SMSP52788 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.55■□□□□ 0.88
SMSP52788 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SMSP52788 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.55■□□□□ 0.88
SMSP52788 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMSP52788 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMSP52788 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMSP52788 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMSP52788 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMSP52788 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMSP52788 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.54■□□□□ 0.88
SMSP52788 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.54■□□□□ 0.88
SMSP52788 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SMSP52788 LINC00565-201ENST00000562710 2331 ntBASIC20.54■□□□□ 0.88
SMSP52788 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.54■□□□□ 0.88
SMSP52788 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SMSP52788 LINC00526-201ENST00000581067 1875 ntBASIC20.54■□□□□ 0.88
SMSP52788 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SMSP52788 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMSP52788 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMSP52788 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.53■□□□□ 0.88
SMSP52788 AF213884.3-201ENST00000563833 479 ntBASIC20.53■□□□□ 0.88
SMSP52788 AL136967.2-201ENST00000623968 743 ntBASIC20.53■□□□□ 0.88
SMSP52788 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMSP52788 ALDH1A3-203ENST00000557963 1670 ntBASIC20.53■□□□□ 0.88
SMSP52788 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
SMSP52788 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SMSP52788 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMSP52788 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SMSP52788 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SMSP52788 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SMSP52788 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMSP52788 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SMSP52788 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMSP52788 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.52■□□□□ 0.88
SMSP52788 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMSP52788 SYT6-210ENST00000641643 1587 ntBASIC20.52■□□□□ 0.88
SMSP52788 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMSP52788 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMSP52788 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.52■□□□□ 0.88
SMSP52788 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.52■□□□□ 0.88
SMSP52788 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SMSP52788 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
SMSP52788 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMSP52788 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMSP52788 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMSP52788 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.52■□□□□ 0.88
SMSP52788 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMSP52788 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMSP52788 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SMSP52788 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMSP52788 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMSP52788 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMSP52788 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.51■□□□□ 0.87
SMSP52788 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.51■□□□□ 0.87
SMSP52788 AC091305.1-201ENST00000479476 895 ntBASIC20.51■□□□□ 0.87
SMSP52788 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMSP52788 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMSP52788 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMSP52788 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMSP52788 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMSP52788 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMSP52788 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SMSP52788 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMSP52788 ECEL1P1-201ENST00000373592 1742 ntBASIC20.5■□□□□ 0.87
SMSP52788 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMSP52788 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMSP52788 AC127496.7-201ENST00000625110 1798 ntBASIC20.5■□□□□ 0.87
SMSP52788 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.5■□□□□ 0.87
SMSP52788 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SMSP52788 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMSP52788 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.5■□□□□ 0.87
SMSP52788 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMSP52788 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMSP52788 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMSP52788 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.49■□□□□ 0.87
SMSP52788 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SMSP52788 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMSP52788 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms