Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 RARA-203ENST00000394086 2008 ntTSL 2 BASIC23.4■■□□□ 1.34
CLCN4P51793 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.39■■□□□ 1.34
CLCN4P51793 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CLCN4P51793 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.34
CLCN4P51793 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.39■■□□□ 1.33
CLCN4P51793 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
CLCN4P51793 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CLCN4P51793 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.39■■□□□ 1.33
CLCN4P51793 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
CLCN4P51793 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CLCN4P51793 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CLCN4P51793 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLCN4P51793 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.38■■□□□ 1.33
CLCN4P51793 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
CLCN4P51793 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CLCN4P51793 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.38■■□□□ 1.33
CLCN4P51793 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
CLCN4P51793 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
CLCN4P51793 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.38■■□□□ 1.33
CLCN4P51793 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.38■■□□□ 1.33
CLCN4P51793 TPRG1LP1-201ENST00000598702 760 ntBASIC23.38■■□□□ 1.33
CLCN4P51793 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.37■■□□□ 1.33
CLCN4P51793 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
CLCN4P51793 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.37■■□□□ 1.33
CLCN4P51793 AC006015.1-201ENST00000429970 570 ntBASIC23.37■■□□□ 1.33
CLCN4P51793 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC23.37■■□□□ 1.33
CLCN4P51793 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLCN4P51793 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLCN4P51793 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
CLCN4P51793 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLCN4P51793 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
CLCN4P51793 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLCN4P51793 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
CLCN4P51793 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLCN4P51793 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC23.36■■□□□ 1.33
CLCN4P51793 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CLCN4P51793 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.36■■□□□ 1.33
CLCN4P51793 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.36■■□□□ 1.33
CLCN4P51793 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
CLCN4P51793 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.36■■□□□ 1.33
CLCN4P51793 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
CLCN4P51793 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
CLCN4P51793 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLCN4P51793 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLCN4P51793 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
CLCN4P51793 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.35■■□□□ 1.33
CLCN4P51793 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLCN4P51793 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.35■■□□□ 1.33
CLCN4P51793 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.35■■□□□ 1.33
CLCN4P51793 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
CLCN4P51793 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.35■■□□□ 1.33
CLCN4P51793 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
CLCN4P51793 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
CLCN4P51793 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CLCN4P51793 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CLCN4P51793 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.34■■□□□ 1.33
CLCN4P51793 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CLCN4P51793 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.34■■□□□ 1.33
CLCN4P51793 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.34■■□□□ 1.33
CLCN4P51793 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.34■■□□□ 1.33
CLCN4P51793 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.34■■□□□ 1.33
CLCN4P51793 AC080038.1-201ENST00000611274 1154 ntBASIC23.34■■□□□ 1.33
CLCN4P51793 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CLCN4P51793 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.34■■□□□ 1.33
CLCN4P51793 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
CLCN4P51793 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
CLCN4P51793 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLCN4P51793 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLCN4P51793 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
CLCN4P51793 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLCN4P51793 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLCN4P51793 HLA-L-209ENST00000420110 1011 ntBASIC23.33■■□□□ 1.33
CLCN4P51793 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.33■■□□□ 1.33
CLCN4P51793 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.33■■□□□ 1.33
CLCN4P51793 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.33■■□□□ 1.33
CLCN4P51793 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLCN4P51793 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
CLCN4P51793 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
CLCN4P51793 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
CLCN4P51793 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLCN4P51793 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CLCN4P51793 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
CLCN4P51793 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
CLCN4P51793 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
CLCN4P51793 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.32■■□□□ 1.32
CLCN4P51793 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.32■■□□□ 1.32
CLCN4P51793 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.32■■□□□ 1.32
CLCN4P51793 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.32■■□□□ 1.32
CLCN4P51793 AL139125.2-201ENST00000623134 1869 ntBASIC23.32■■□□□ 1.32
CLCN4P51793 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
CLCN4P51793 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.31■■□□□ 1.32
CLCN4P51793 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.31■■□□□ 1.32
CLCN4P51793 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN4P51793 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.31■■□□□ 1.32
CLCN4P51793 AC137761.2-201ENST00000561729 223 ntBASIC23.31■■□□□ 1.32
CLCN4P51793 AC145350.3-201ENST00000569033 163 ntBASIC23.31■■□□□ 1.32
CLCN4P51793 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN4P51793 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN4P51793 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CLCN4P51793 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms