Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 AC144652.1-201ENST00000609974 1624 ntBASIC18.16■□□□□ 0.5
THBS3P49746 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
THBS3P49746 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.16■□□□□ 0.5
THBS3P49746 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.16■□□□□ 0.5
THBS3P49746 KRT16P3-201ENST00000439127 1283 ntBASIC18.16■□□□□ 0.5
THBS3P49746 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
THBS3P49746 ESRRAP2-201ENST00000418437 1549 ntBASIC18.16■□□□□ 0.5
THBS3P49746 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
THBS3P49746 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.16■□□□□ 0.5
THBS3P49746 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
THBS3P49746 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
THBS3P49746 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
THBS3P49746 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
THBS3P49746 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.15■□□□□ 0.5
THBS3P49746 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
THBS3P49746 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.15■□□□□ 0.5
THBS3P49746 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.15■□□□□ 0.5
THBS3P49746 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
THBS3P49746 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.15■□□□□ 0.5
THBS3P49746 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.15■□□□□ 0.5
THBS3P49746 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
THBS3P49746 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.15■□□□□ 0.5
THBS3P49746 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
THBS3P49746 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
THBS3P49746 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
THBS3P49746 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
THBS3P49746 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
THBS3P49746 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.14■□□□□ 0.49
THBS3P49746 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
THBS3P49746 TSPY9P-201ENST00000440215 945 ntBASIC18.14■□□□□ 0.49
THBS3P49746 TSPY11P-201ENST00000442607 1045 ntBASIC18.14■□□□□ 0.49
THBS3P49746 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
THBS3P49746 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
THBS3P49746 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
THBS3P49746 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
THBS3P49746 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
THBS3P49746 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
THBS3P49746 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
THBS3P49746 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
THBS3P49746 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
THBS3P49746 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
THBS3P49746 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
THBS3P49746 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
THBS3P49746 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
THBS3P49746 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.13■□□□□ 0.49
THBS3P49746 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.13■□□□□ 0.49
THBS3P49746 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
THBS3P49746 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.13■□□□□ 0.49
THBS3P49746 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.13■□□□□ 0.49
THBS3P49746 AC092028.1-203ENST00000608262 953 ntBASIC18.13■□□□□ 0.49
THBS3P49746 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
THBS3P49746 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.13■□□□□ 0.49
THBS3P49746 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
THBS3P49746 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.13■□□□□ 0.49
THBS3P49746 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.13■□□□□ 0.49
THBS3P49746 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.13■□□□□ 0.49
THBS3P49746 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
THBS3P49746 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
THBS3P49746 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.12■□□□□ 0.49
THBS3P49746 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
THBS3P49746 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
THBS3P49746 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
THBS3P49746 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.12■□□□□ 0.49
THBS3P49746 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.12■□□□□ 0.49
THBS3P49746 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.12■□□□□ 0.49
THBS3P49746 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
THBS3P49746 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
THBS3P49746 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.12■□□□□ 0.49
THBS3P49746 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
THBS3P49746 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.12■□□□□ 0.49
THBS3P49746 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
THBS3P49746 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
THBS3P49746 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
THBS3P49746 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
THBS3P49746 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THBS3P49746 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THBS3P49746 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.11■□□□□ 0.49
THBS3P49746 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.11■□□□□ 0.49
THBS3P49746 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
THBS3P49746 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THBS3P49746 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THBS3P49746 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.11■□□□□ 0.49
THBS3P49746 GUSBP5-202ENST00000510805 1989 ntBASIC18.11■□□□□ 0.49
THBS3P49746 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THBS3P49746 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
THBS3P49746 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.1■□□□□ 0.49
THBS3P49746 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
THBS3P49746 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THBS3P49746 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.1■□□□□ 0.49
THBS3P49746 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
THBS3P49746 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THBS3P49746 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THBS3P49746 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THBS3P49746 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THBS3P49746 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THBS3P49746 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THBS3P49746 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.1■□□□□ 0.49
THBS3P49746 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THBS3P49746 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.1■□□□□ 0.49
THBS3P49746 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms