Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 RUF5-1RUF5-1 710 nt4.98□□□□□ -1.61
TY1B-JR1P47098 RUF5-2RUF5-2 710 nt4.98□□□□□ -1.61
TY1B-JR1P47098 TAH18YPR048W 1872 nt4.98□□□□□ -1.61
TY1B-JR1P47098 NUP60YAR002W 1620 nt4.98□□□□□ -1.61
TY1B-JR1P47098 NTO1YPR031W 2247 nt4.98□□□□□ -1.61
TY1B-JR1P47098 TPO2YGR138C 1845 nt4.97□□□□□ -1.61
TY1B-JR1P47098 SOF1YLL011W 1470 nt4.97□□□□□ -1.61
TY1B-JR1P47098 INN1YNL152W 1230 nt4.96□□□□□ -1.61
TY1B-JR1P47098 MLH2YLR035C 2088 nt4.96□□□□□ -1.62
TY1B-JR1P47098 HMF1YER057C 390 nt4.96□□□□□ -1.62
TY1B-JR1P47098 PEA2YER149C 1263 nt4.96□□□□□ -1.62
TY1B-JR1P47098 ERG2YMR202W 669 nt4.96□□□□□ -1.62
TY1B-JR1P47098 TPM1YNL079C 600 nt4.96□□□□□ -1.62
TY1B-JR1P47098 THR4YCR053W 1545 nt4.95□□□□□ -1.62
TY1B-JR1P47098 MDR1YGR100W 2853 nt4.95□□□□□ -1.62
TY1B-JR1P47098 RPS8BYER102W 603 nt4.95□□□□□ -1.62
TY1B-JR1P47098 YHL034W-AYHL034W-A 462 nt4.95□□□□□ -1.62
TY1B-JR1P47098 RPS8AYBL072C 603 nt4.95□□□□□ -1.62
TY1B-JR1P47098 DNM1YLL001W 2274 nt4.94□□□□□ -1.62
TY1B-JR1P47098 CHL4YDR254W 1377 nt4.94□□□□□ -1.62
TY1B-JR1P47098 MRPS35YGR165W 1038 nt4.94□□□□□ -1.62
TY1B-JR1P47098 SOP4YJL192C 705 nt4.94□□□□□ -1.62
TY1B-JR1P47098 VID28YIL017C 2766 nt4.94□□□□□ -1.62
TY1B-JR1P47098 CHO2YGR157W 2610 nt4.94□□□□□ -1.62
TY1B-JR1P47098 NHX1YDR456W 1902 nt4.94□□□□□ -1.62
TY1B-JR1P47098 RAD54YGL163C 2697 nt4.94□□□□□ -1.62
TY1B-JR1P47098 VHC1YBR235W 3363 nt4.93□□□□□ -1.62
TY1B-JR1P47098 AUR1YKL004W 1206 nt4.92□□□□□ -1.62
TY1B-JR1P47098 CFD1YIL003W 882 nt4.91□□□□□ -1.62
TY1B-JR1P47098 EMW1YNL313C 2715 nt4.91□□□□□ -1.62
TY1B-JR1P47098 CDC21YOR074C 915 nt4.91□□□□□ -1.62
TY1B-JR1P47098 VPS21YOR089C 633 nt4.91□□□□□ -1.62
TY1B-JR1P47098 NOC2YOR206W 2133 nt4.9□□□□□ -1.62
TY1B-JR1P47098 PMC1YGL006W 3522 nt4.9□□□□□ -1.63
TY1B-JR1P47098 ERG26YGL001C 1050 nt4.9□□□□□ -1.63
TY1B-JR1P47098 RRG9YNL213C 645 nt4.9□□□□□ -1.63
TY1B-JR1P47098 GPR1YDL035C 2886 nt4.9□□□□□ -1.63
TY1B-JR1P47098 NHP10YDL002C 612 nt4.89□□□□□ -1.63
TY1B-JR1P47098 YMR087WYMR087W 855 nt4.89□□□□□ -1.63
TY1B-JR1P47098 SGT1YOR057W 1188 nt4.89□□□□□ -1.63
TY1B-JR1P47098 NMA111YNL123W 2994 nt4.89□□□□□ -1.63
TY1B-JR1P47098 MKC7YDR144C 1791 nt4.89□□□□□ -1.63
TY1B-JR1P47098 TGL3YMR313C 1929 nt4.89□□□□□ -1.63
TY1B-JR1P47098 VBA2YBR293W 1425 nt4.88□□□□□ -1.63
TY1B-JR1P47098 CAF120YNL278W 3183 nt4.88□□□□□ -1.63
TY1B-JR1P47098 YME2YMR302C 2553 nt4.88□□□□□ -1.63
TY1B-JR1P47098 PSE1YMR308C 3270 nt4.88□□□□□ -1.63
TY1B-JR1P47098 RRN7YJL025W 1545 nt4.88□□□□□ -1.63
TY1B-JR1P47098 YLH47YPR125W 1365 nt4.88□□□□□ -1.63
TY1B-JR1P47098 MPA43YNL249C 1629 nt4.88□□□□□ -1.63
TY1B-JR1P47098 PCI8YIL071C 1335 nt4.88□□□□□ -1.63
TY1B-JR1P47098 ACC1YNR016C 6702 nt4.88□□□□□ -1.63
TY1B-JR1P47098 OXR1YPL196W 822 nt4.88□□□□□ -1.63
TY1B-JR1P47098 SUI3YPL237W 858 nt4.88□□□□□ -1.63
TY1B-JR1P47098 UBP5YER144C 2418 nt4.88□□□□□ -1.63
TY1B-JR1P47098 TAF7YMR227C 1773 nt4.87□□□□□ -1.63
TY1B-JR1P47098 TLG1YDR468C 675 nt4.87□□□□□ -1.63
TY1B-JR1P47098 GYP6YJL044C 1377 nt4.87□□□□□ -1.63
TY1B-JR1P47098 TMN2YDR107C 2019 nt4.87□□□□□ -1.63
TY1B-JR1P47098 ENT3YJR125C 1227 nt4.86□□□□□ -1.63
TY1B-JR1P47098 YFR006WYFR006W 1608 nt4.86□□□□□ -1.63
TY1B-JR1P47098 PRE8YML092C 753 nt4.86□□□□□ -1.63
TY1B-JR1P47098 GPI12YMR281W 915 nt4.86□□□□□ -1.63
TY1B-JR1P47098 FMP30YPL103C 1407 nt4.85□□□□□ -1.63
TY1B-JR1P47098 RPB2YOR151C 3675 nt4.85□□□□□ -1.63
TY1B-JR1P47098 RTK1YDL025C 1863 nt4.85□□□□□ -1.63
TY1B-JR1P47098 HCA4YJL033W 2313 nt4.85□□□□□ -1.63
TY1B-JR1P47098 NFT1YKR103W 3657 nt4.84□□□□□ -1.63
TY1B-JR1P47098 LPP1YDR503C 825 nt4.84□□□□□ -1.63
TY1B-JR1P47098 NCE103YNL036W 666 nt4.84□□□□□ -1.63
TY1B-JR1P47098 KRE5YOR336W 4098 nt4.84□□□□□ -1.63
TY1B-JR1P47098 MTR4YJL050W 3222 nt4.84□□□□□ -1.63
TY1B-JR1P47098 DEG1YFL001W 1329 nt4.84□□□□□ -1.63
TY1B-JR1P47098 NMD2YHR077C 3270 nt4.84□□□□□ -1.63
TY1B-JR1P47098 GSC2YGR032W 5688 nt4.84□□□□□ -1.64
TY1B-JR1P47098 IFM1YOL023W 2031 nt4.83□□□□□ -1.64
TY1B-JR1P47098 YLR339CYLR339C 552 nt4.83□□□□□ -1.64
TY1B-JR1P47098 TIR2YOR010C 756 nt4.83□□□□□ -1.64
TY1B-JR1P47098 ENV9YOR246C 993 nt4.83□□□□□ -1.64
TY1B-JR1P47098 MSS1YMR023C 1581 nt4.83□□□□□ -1.64
TY1B-JR1P47098 CLD1YGR110W 1338 nt4.83□□□□□ -1.64
TY1B-JR1P47098 NUS1YDL193W 1128 nt4.83□□□□□ -1.64
TY1B-JR1P47098 YGR266WYGR266W 2106 nt4.83□□□□□ -1.64
TY1B-JR1P47098 DOG2YHR043C 741 nt4.83□□□□□ -1.64
TY1B-JR1P47098 SED5YLR026C 1023 nt4.83□□□□□ -1.64
TY1B-JR1P47098 TPK2YPL203W 1143 nt4.83□□□□□ -1.64
TY1B-JR1P47098 TYW1YPL207W 2433 nt4.83□□□□□ -1.64
TY1B-JR1P47098 ASN1YPR145W 1719 nt4.83□□□□□ -1.64
TY1B-JR1P47098 OSH3YHR073W 2991 nt4.82□□□□□ -1.64
TY1B-JR1P47098 SYF1YDR416W 2580 nt4.82□□□□□ -1.64
TY1B-JR1P47098 SFI1YLL003W 2841 nt4.82□□□□□ -1.64
TY1B-JR1P47098 YHR214C-DYHR214C-D 294 nt4.82□□□□□ -1.64
TY1B-JR1P47098 YAR069CYAR069C 294 nt4.82□□□□□ -1.64
TY1B-JR1P47098 YKL222CYKL222C 2118 nt4.82□□□□□ -1.64
TY1B-JR1P47098 YJR030CYJR030C 2238 nt4.82□□□□□ -1.64
TY1B-JR1P47098 TGS1YPL157W 948 nt4.81□□□□□ -1.64
TY1B-JR1P47098 WRS1YOL097C 1299 nt4.81□□□□□ -1.64
TY1B-JR1P47098 SEC27YGL137W 2670 nt4.8□□□□□ -1.64
TY1B-JR1P47098 MET7YOR241W 1647 nt4.8□□□□□ -1.64
TY1B-JR1P47098 YNL247WYNL247W 2304 nt4.8□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms