Protein–RNA interactions for Protein: P46094

XCR1, Chemokine XC receptor 1, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1P46094 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
XCR1P46094 MIR4767-201ENST00000582827 78 ntBASIC21.04■□□□□ 0.96
XCR1P46094 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.04■□□□□ 0.96
XCR1P46094 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
XCR1P46094 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
XCR1P46094 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
XCR1P46094 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
XCR1P46094 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.04■□□□□ 0.96
XCR1P46094 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.04■□□□□ 0.96
XCR1P46094 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XCR1P46094 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
XCR1P46094 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.03■□□□□ 0.96
XCR1P46094 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.03■□□□□ 0.96
XCR1P46094 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
XCR1P46094 AC005837.3-201ENST00000612163 286 ntBASIC21.03■□□□□ 0.96
XCR1P46094 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XCR1P46094 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.03■□□□□ 0.96
XCR1P46094 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
XCR1P46094 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.03■□□□□ 0.96
XCR1P46094 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
XCR1P46094 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.02■□□□□ 0.96
XCR1P46094 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
XCR1P46094 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.02■□□□□ 0.96
XCR1P46094 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
XCR1P46094 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
XCR1P46094 EDA-201ENST00000338901 1233 ntBASIC21.02■□□□□ 0.96
XCR1P46094 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.02■□□□□ 0.96
XCR1P46094 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.02■□□□□ 0.96
XCR1P46094 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.02■□□□□ 0.96
XCR1P46094 AC136469.2-201ENST00000623944 1028 ntBASIC21.02■□□□□ 0.96
XCR1P46094 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
XCR1P46094 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
XCR1P46094 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
XCR1P46094 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
XCR1P46094 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
XCR1P46094 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XCR1P46094 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XCR1P46094 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
XCR1P46094 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.01■□□□□ 0.95
XCR1P46094 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
XCR1P46094 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.01■□□□□ 0.95
XCR1P46094 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
XCR1P46094 AL353803.4-201ENST00000565882 1934 ntBASIC21.01■□□□□ 0.95
XCR1P46094 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
XCR1P46094 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
XCR1P46094 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.01■□□□□ 0.95
XCR1P46094 AC019069.1-201ENST00000610008 1333 ntBASIC21.01■□□□□ 0.95
XCR1P46094 C1orf229-201ENST00000623686 2258 ntBASIC21.01■□□□□ 0.95
XCR1P46094 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
XCR1P46094 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21■□□□□ 0.95
XCR1P46094 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21■□□□□ 0.95
XCR1P46094 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
XCR1P46094 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21■□□□□ 0.95
XCR1P46094 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21■□□□□ 0.95
XCR1P46094 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
XCR1P46094 GRAMD4P4-201ENST00000613563 1115 ntBASIC21■□□□□ 0.95
XCR1P46094 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21■□□□□ 0.95
XCR1P46094 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
XCR1P46094 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
XCR1P46094 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XCR1P46094 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21■□□□□ 0.95
XCR1P46094 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
XCR1P46094 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
XCR1P46094 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
XCR1P46094 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
XCR1P46094 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
XCR1P46094 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
XCR1P46094 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XCR1P46094 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.99■□□□□ 0.95
XCR1P46094 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.99■□□□□ 0.95
XCR1P46094 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
XCR1P46094 AL499627.2-201ENST00000606283 725 ntBASIC20.99■□□□□ 0.95
XCR1P46094 AL355001.2-201ENST00000620617 1191 ntBASIC20.99■□□□□ 0.95
XCR1P46094 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
XCR1P46094 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.99■□□□□ 0.95
XCR1P46094 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
XCR1P46094 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XCR1P46094 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XCR1P46094 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
XCR1P46094 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
XCR1P46094 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.98■□□□□ 0.95
XCR1P46094 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.98■□□□□ 0.95
XCR1P46094 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
XCR1P46094 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
XCR1P46094 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.98■□□□□ 0.95
XCR1P46094 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
XCR1P46094 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.98■□□□□ 0.95
XCR1P46094 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
XCR1P46094 AC142381.2-201ENST00000566120 298 ntBASIC20.98■□□□□ 0.95
XCR1P46094 AL031432.3-201ENST00000607698 485 ntBASIC20.98■□□□□ 0.95
XCR1P46094 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
XCR1P46094 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XCR1P46094 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XCR1P46094 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
XCR1P46094 AC133637.1-201ENST00000624115 1537 ntBASIC20.98■□□□□ 0.95
XCR1P46094 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
XCR1P46094 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.98■□□□□ 0.95
XCR1P46094 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
XCR1P46094 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
XCR1P46094 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms