Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 YDL109CYDL109C 1944 nt4.47□□□□□ -1.69
RTR1P40084 YGR266WYGR266W 2106 nt4.47□□□□□ -1.69
RTR1P40084 YML119WYML119W 1074 nt4.47□□□□□ -1.69
RTR1P40084 MRM1YOR201C 1239 nt4.47□□□□□ -1.69
RTR1P40084 TED1YIL039W 1422 nt4.46□□□□□ -1.69
RTR1P40084 RPO21YDL140C 5202 nt4.46□□□□□ -1.69
RTR1P40084 SEO1YAL067C 1782 nt4.46□□□□□ -1.7
RTR1P40084 MDM30YLR368W 1797 nt4.46□□□□□ -1.7
RTR1P40084 GSH2YOL049W 1476 nt4.46□□□□□ -1.7
RTR1P40084 YDL032WYDL032W 312 nt4.46□□□□□ -1.7
RTR1P40084 RIM11YMR139W 1113 nt4.46□□□□□ -1.7
RTR1P40084 NOP13YNL175C 1212 nt4.46□□□□□ -1.7
RTR1P40084 GAS4YOL132W 1416 nt4.46□□□□□ -1.7
RTR1P40084 PMT4YJR143C 2289 nt4.46□□□□□ -1.7
RTR1P40084 TIF4632YGL049C 2745 nt4.45□□□□□ -1.7
RTR1P40084 HCA4YJL033W 2313 nt4.45□□□□□ -1.7
RTR1P40084 HFD1YMR110C 1599 nt4.45□□□□□ -1.7
RTR1P40084 RPB7YDR404C 516 nt4.45□□□□□ -1.7
RTR1P40084 RRT7YLL030C 342 nt4.45□□□□□ -1.7
RTR1P40084 RFC3YNL290W 1023 nt4.45□□□□□ -1.7
RTR1P40084 YBR137WYBR137W 540 nt4.45□□□□□ -1.7
RTR1P40084 LRG1YDL240W 3054 nt4.44□□□□□ -1.7
RTR1P40084 DBP3YGL078C 1572 nt4.44□□□□□ -1.7
RTR1P40084 MDM34YGL219C 1380 nt4.44□□□□□ -1.7
RTR1P40084 FMP48YGR052W 1110 nt4.44□□□□□ -1.7
RTR1P40084 AIR1YIL079C 1083 nt4.44□□□□□ -1.7
RTR1P40084 SDS3YIL084C 984 nt4.44□□□□□ -1.7
RTR1P40084 JLP1YLL057C 1239 nt4.44□□□□□ -1.7
RTR1P40084 YMR084WYMR084W 789 nt4.44□□□□□ -1.7
RTR1P40084 RAD2YGR258C 3096 nt4.44□□□□□ -1.7
RTR1P40084 HOM3YER052C 1584 nt4.44□□□□□ -1.7
RTR1P40084 RPS11AYDR025W 471 nt4.43□□□□□ -1.7
RTR1P40084 YDR274CYDR274C 372 nt4.43□□□□□ -1.7
RTR1P40084 BCP1YDR361C 852 nt4.43□□□□□ -1.7
RTR1P40084 FMP32YFL046W 624 nt4.43□□□□□ -1.7
RTR1P40084 OAR1YKL055C 837 nt4.43□□□□□ -1.7
RTR1P40084 IRC25YLR021W 540 nt4.43□□□□□ -1.7
RTR1P40084 ORM2YLR350W 651 nt4.43□□□□□ -1.7
RTR1P40084 PLP2YOR281C 861 nt4.43□□□□□ -1.7
RTR1P40084 SPT6YGR116W 4356 nt4.43□□□□□ -1.7
RTR1P40084 SNF2YOR290C 5112 nt4.43□□□□□ -1.7
RTR1P40084 MMR1YLR190W 1476 nt4.43□□□□□ -1.7
RTR1P40084 CDS1YBR029C 1374 nt4.42□□□□□ -1.7
RTR1P40084 RAM1YDL090C 1296 nt4.42□□□□□ -1.7
RTR1P40084 UBC6YER100W 753 nt4.42□□□□□ -1.7
RTR1P40084 BMH1YER177W 804 nt4.42□□□□□ -1.7
RTR1P40084 RPL22AYLR061W 366 nt4.42□□□□□ -1.7
RTR1P40084 WRS1YOL097C 1299 nt4.42□□□□□ -1.7
RTR1P40084 OPY1YBR129C 987 nt4.42□□□□□ -1.7
RTR1P40084 CEX1YOR112W 2286 nt4.42□□□□□ -1.7
RTR1P40084 LAP3YNL239W 1365 nt4.41□□□□□ -1.7
RTR1P40084 TYW1YPL207W 2433 nt4.41□□□□□ -1.7
RTR1P40084 ERG20YJL167W 1059 nt4.41□□□□□ -1.7
RTR1P40084 VTA1YLR181C 993 nt4.41□□□□□ -1.7
RTR1P40084 NIS1YNL078W 1224 nt4.41□□□□□ -1.7
RTR1P40084 RPC19YNL113W 429 nt4.41□□□□□ -1.7
RTR1P40084 PHA2YNL316C 1005 nt4.41□□□□□ -1.7
RTR1P40084 MFM1YPL060W 1242 nt4.41□□□□□ -1.7
RTR1P40084 GSM1YJL103C 1857 nt4.41□□□□□ -1.7
RTR1P40084 CLB4YLR210W 1383 nt4.4□□□□□ -1.7
RTR1P40084 MRPL11YDL202W 750 nt4.4□□□□□ -1.71
RTR1P40084 SOP4YJL192C 705 nt4.4□□□□□ -1.71
RTR1P40084 CYC1YJR048W 330 nt4.4□□□□□ -1.71
RTR1P40084 YRA2YKL214C 612 nt4.4□□□□□ -1.71
RTR1P40084 YMR315WYMR315W 1050 nt4.4□□□□□ -1.71
RTR1P40084 TIR2YOR010C 756 nt4.4□□□□□ -1.71
RTR1P40084 TEL1YBL088C 8364 nt4.4□□□□□ -1.71
RTR1P40084 YOR022CYOR022C 2148 nt4.4□□□□□ -1.71
RTR1P40084 RPO31YOR116C 4383 nt4.4□□□□□ -1.71
RTR1P40084 TAF7YMR227C 1773 nt4.4□□□□□ -1.71
RTR1P40084 AVT1YJR001W 1809 nt4.39□□□□□ -1.71
RTR1P40084 TAF1YGR274C 3201 nt4.39□□□□□ -1.71
RTR1P40084 ALA1YOR335C 2877 nt4.39□□□□□ -1.71
RTR1P40084 IRC9YJL142C 393 nt4.39□□□□□ -1.71
RTR1P40084 DAN1YJR150C 897 nt4.39□□□□□ -1.71
RTR1P40084 OSH3YHR073W 2991 nt4.39□□□□□ -1.71
RTR1P40084 RSC1YGR056W 2787 nt4.39□□□□□ -1.71
RTR1P40084 KTR7YIL085C 1554 nt4.39□□□□□ -1.71
RTR1P40084 RNR1YER070W 2667 nt4.39□□□□□ -1.71
RTR1P40084 RPA14YDR156W 414 nt4.38□□□□□ -1.71
RTR1P40084 RPS8BYER102W 603 nt4.38□□□□□ -1.71
RTR1P40084 LNP1YHR192W 837 nt4.38□□□□□ -1.71
RTR1P40084 GTT2YLL060C 702 nt4.38□□□□□ -1.71
RTR1P40084 PML1YLR016C 615 nt4.38□□□□□ -1.71
RTR1P40084 RPS8AYBL072C 603 nt4.38□□□□□ -1.71
RTR1P40084 MCK1YNL307C 1128 nt4.38□□□□□ -1.71
RTR1P40084 MED7YOL135C 669 nt4.38□□□□□ -1.71
RTR1P40084 YBR196C-BYBR196C-B 105 nt4.38□□□□□ -1.71
RTR1P40084 CHK1YBR274W 1584 nt4.38□□□□□ -1.71
RTR1P40084 CMK1YFR014C 1341 nt4.38□□□□□ -1.71
RTR1P40084 RRN11YML043C 1524 nt4.37□□□□□ -1.71
RTR1P40084 DCV1YFR012W 609 nt4.37□□□□□ -1.71
RTR1P40084 YOR034C-AYOR034C-A 243 nt4.37□□□□□ -1.71
RTR1P40084 TRM44YPL030W 1704 nt4.37□□□□□ -1.71
RTR1P40084 GIP4YAL031C 2283 nt4.37□□□□□ -1.71
RTR1P40084 MNL1YHR204W 2391 nt4.36□□□□□ -1.71
RTR1P40084 IZH3YLR023C 1632 nt4.36□□□□□ -1.71
RTR1P40084 PUT2YHR037W 1728 nt4.36□□□□□ -1.71
RTR1P40084 RAD4YER162C 2265 nt4.36□□□□□ -1.71
RTR1P40084 HIM1YDR317W 1245 nt4.36□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 20.4 ms