Protein–RNA interactions for Protein: P28072

PSMB6, Proteasome subunit beta type-6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB6P28072 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PSMB6P28072 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PSMB6P28072 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PSMB6P28072 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PSMB6P28072 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PSMB6P28072 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PSMB6P28072 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PSMB6P28072 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PSMB6P28072 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
PSMB6P28072 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.37■□□□□ 0.53
PSMB6P28072 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.37■□□□□ 0.53
PSMB6P28072 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PSMB6P28072 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
PSMB6P28072 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PSMB6P28072 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PSMB6P28072 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PSMB6P28072 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PSMB6P28072 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.37■□□□□ 0.53
PSMB6P28072 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PSMB6P28072 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PSMB6P28072 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PSMB6P28072 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PSMB6P28072 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PSMB6P28072 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PSMB6P28072 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PSMB6P28072 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PSMB6P28072 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PSMB6P28072 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PSMB6P28072 AC139795.1-202ENST00000500444 432 ntBASIC18.36■□□□□ 0.53
PSMB6P28072 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PSMB6P28072 DUX4L18-201ENST00000553347 1267 ntBASIC18.36■□□□□ 0.53
PSMB6P28072 AC090877.2-201ENST00000558441 1738 ntBASIC18.36■□□□□ 0.53
PSMB6P28072 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.36■□□□□ 0.53
PSMB6P28072 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.36■□□□□ 0.53
PSMB6P28072 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PSMB6P28072 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PSMB6P28072 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PSMB6P28072 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PSMB6P28072 AC079630.1-202ENST00000618127 1840 ntBASIC18.35■□□□□ 0.53
PSMB6P28072 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PSMB6P28072 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PSMB6P28072 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PSMB6P28072 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PSMB6P28072 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.35■□□□□ 0.53
PSMB6P28072 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PSMB6P28072 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PSMB6P28072 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PSMB6P28072 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PSMB6P28072 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.34■□□□□ 0.53
PSMB6P28072 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
PSMB6P28072 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PSMB6P28072 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PSMB6P28072 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PSMB6P28072 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.34■□□□□ 0.53
PSMB6P28072 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PSMB6P28072 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PSMB6P28072 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PSMB6P28072 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PSMB6P28072 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PSMB6P28072 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PSMB6P28072 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PSMB6P28072 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.34■□□□□ 0.53
PSMB6P28072 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PSMB6P28072 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
PSMB6P28072 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PSMB6P28072 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PSMB6P28072 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
PSMB6P28072 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.33■□□□□ 0.53
PSMB6P28072 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PSMB6P28072 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC18.33■□□□□ 0.53
PSMB6P28072 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.33■□□□□ 0.52
PSMB6P28072 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PSMB6P28072 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
PSMB6P28072 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.33■□□□□ 0.52
PSMB6P28072 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PSMB6P28072 AC080038.3-201ENST00000623346 1952 ntBASIC18.33■□□□□ 0.52
PSMB6P28072 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PSMB6P28072 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PSMB6P28072 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PSMB6P28072 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PSMB6P28072 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PSMB6P28072 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PSMB6P28072 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PSMB6P28072 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PSMB6P28072 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PSMB6P28072 AC019171.1-201ENST00000601251 1056 ntBASIC18.32■□□□□ 0.52
PSMB6P28072 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PSMB6P28072 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PSMB6P28072 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PSMB6P28072 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PSMB6P28072 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PSMB6P28072 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.31■□□□□ 0.52
PSMB6P28072 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PSMB6P28072 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PSMB6P28072 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PSMB6P28072 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PSMB6P28072 AC004987.1-201ENST00000428627 508 ntBASIC18.31■□□□□ 0.52
PSMB6P28072 ATP5G2P3-201ENST00000429083 425 ntBASIC18.31■□□□□ 0.52
PSMB6P28072 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.31■□□□□ 0.52
PSMB6P28072 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms