Protein–RNA interactions for Protein: P25774

CTSS, Cathepsin S, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSSP25774 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.76■□□□□ 0.75
CTSSP25774 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CTSSP25774 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.76■□□□□ 0.75
CTSSP25774 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.76■□□□□ 0.75
CTSSP25774 AC104564.3-201ENST00000582367 638 ntBASIC19.76■□□□□ 0.75
CTSSP25774 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTSSP25774 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.76■□□□□ 0.75
CTSSP25774 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CTSSP25774 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.76■□□□□ 0.75
CTSSP25774 LINC01529-204ENST00000636474 1715 ntBASIC19.76■□□□□ 0.75
CTSSP25774 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
CTSSP25774 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTSSP25774 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSSP25774 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTSSP25774 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.75■□□□□ 0.75
CTSSP25774 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
CTSSP25774 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSSP25774 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.75■□□□□ 0.75
CTSSP25774 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSSP25774 AC087623.3-201ENST00000607047 1098 ntBASIC19.75■□□□□ 0.75
CTSSP25774 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.75■□□□□ 0.75
CTSSP25774 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSSP25774 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSSP25774 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CTSSP25774 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CTSSP25774 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CTSSP25774 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSSP25774 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.74■□□□□ 0.75
CTSSP25774 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSSP25774 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.74■□□□□ 0.75
CTSSP25774 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CTSSP25774 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.74■□□□□ 0.75
CTSSP25774 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.74■□□□□ 0.75
CTSSP25774 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.74■□□□□ 0.75
CTSSP25774 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSSP25774 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CTSSP25774 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSSP25774 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSSP25774 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTSSP25774 AC133561.1-201ENST00000568600 2415 ntBASIC19.74■□□□□ 0.75
CTSSP25774 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTSSP25774 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.74■□□□□ 0.75
CTSSP25774 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CTSSP25774 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CTSSP25774 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CTSSP25774 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CTSSP25774 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSSP25774 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSSP25774 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSSP25774 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSSP25774 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSSP25774 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSSP25774 IGHV3-19-201ENST00000521488 291 ntBASIC19.73■□□□□ 0.75
CTSSP25774 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.73■□□□□ 0.75
CTSSP25774 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.73■□□□□ 0.75
CTSSP25774 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.73■□□□□ 0.75
CTSSP25774 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.73■□□□□ 0.75
CTSSP25774 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CTSSP25774 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CTSSP25774 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CTSSP25774 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.73■□□□□ 0.75
CTSSP25774 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.73■□□□□ 0.75
CTSSP25774 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.73■□□□□ 0.75
CTSSP25774 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
CTSSP25774 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CTSSP25774 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.72■□□□□ 0.75
CTSSP25774 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.72■□□□□ 0.75
CTSSP25774 OR2I1P-207ENST00000453522 948 ntBASIC19.72■□□□□ 0.75
CTSSP25774 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTSSP25774 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CTSSP25774 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CTSSP25774 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CTSSP25774 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.71■□□□□ 0.75
CTSSP25774 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSSP25774 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSSP25774 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSSP25774 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSSP25774 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CTSSP25774 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.71■□□□□ 0.75
CTSSP25774 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSSP25774 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CTSSP25774 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTSSP25774 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.71■□□□□ 0.75
CTSSP25774 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CTSSP25774 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CTSSP25774 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CTSSP25774 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSSP25774 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.7■□□□□ 0.74
CTSSP25774 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
CTSSP25774 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTSSP25774 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.7■□□□□ 0.74
CTSSP25774 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.7■□□□□ 0.74
CTSSP25774 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSSP25774 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.7■□□□□ 0.74
CTSSP25774 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSSP25774 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CTSSP25774 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CTSSP25774 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.7■□□□□ 0.74
CTSSP25774 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CTSSP25774 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms