Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL1P22362 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCL1P22362 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CCL1P22362 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL1P22362 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CCL1P22362 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL1P22362 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL1P22362 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL1P22362 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.06■□□□□ 0.64
CCL1P22362 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CCL1P22362 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CCL1P22362 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL1P22362 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL1P22362 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.05■□□□□ 0.64
CCL1P22362 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.05■□□□□ 0.64
CCL1P22362 AC239859.2-201ENST00000444165 318 ntBASIC19.05■□□□□ 0.64
CCL1P22362 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.05■□□□□ 0.64
CCL1P22362 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCL1P22362 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL1P22362 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.05■□□□□ 0.64
CCL1P22362 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCL1P22362 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL1P22362 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.05■□□□□ 0.64
CCL1P22362 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCL1P22362 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCL1P22362 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL1P22362 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.04■□□□□ 0.64
CCL1P22362 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CCL1P22362 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL1P22362 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.04■□□□□ 0.64
CCL1P22362 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL1P22362 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL1P22362 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL1P22362 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.04■□□□□ 0.64
CCL1P22362 AC009299.2-201ENST00000482477 511 ntBASIC19.04■□□□□ 0.64
CCL1P22362 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCL1P22362 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL1P22362 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.04■□□□□ 0.64
CCL1P22362 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCL1P22362 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL1P22362 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCL1P22362 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.03■□□□□ 0.64
CCL1P22362 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCL1P22362 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCL1P22362 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL1P22362 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL1P22362 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
CCL1P22362 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.03■□□□□ 0.64
CCL1P22362 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC19.03■□□□□ 0.64
CCL1P22362 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL1P22362 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCL1P22362 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCL1P22362 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL1P22362 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCL1P22362 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCL1P22362 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL1P22362 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL1P22362 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCL1P22362 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCL1P22362 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.02■□□□□ 0.64
CCL1P22362 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL1P22362 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL1P22362 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL1P22362 CA15P2-201ENST00000611168 834 ntBASIC19.02■□□□□ 0.64
CCL1P22362 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCL1P22362 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.02■□□□□ 0.63
CCL1P22362 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.02■□□□□ 0.63
CCL1P22362 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCL1P22362 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.02■□□□□ 0.63
CCL1P22362 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.01■□□□□ 0.63
CCL1P22362 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCL1P22362 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCL1P22362 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CCL1P22362 AC004687.1-201ENST00000579003 1625 ntBASIC19.01■□□□□ 0.63
CCL1P22362 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.01■□□□□ 0.63
CCL1P22362 AL451085.2-201ENST00000605085 799 ntBASIC19.01■□□□□ 0.63
CCL1P22362 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.01■□□□□ 0.63
CCL1P22362 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCL1P22362 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
CCL1P22362 TSPY9P-201ENST00000440215 945 ntBASIC19■□□□□ 0.63
CCL1P22362 TSPY11P-201ENST00000442607 1045 ntBASIC19■□□□□ 0.63
CCL1P22362 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCL1P22362 AL499627.2-201ENST00000606283 725 ntBASIC19■□□□□ 0.63
CCL1P22362 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCL1P22362 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCL1P22362 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCL1P22362 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL1P22362 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL1P22362 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL1P22362 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL1P22362 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL1P22362 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL1P22362 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCL1P22362 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL1P22362 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.99■□□□□ 0.63
CCL1P22362 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CCL1P22362 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
CCL1P22362 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCL1P22362 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.99■□□□□ 0.63
CCL1P22362 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms