Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
UBL4AP11441 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.32■□□□□ 0.84
UBL4AP11441 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
UBL4AP11441 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBL4AP11441 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.32■□□□□ 0.84
UBL4AP11441 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.32■□□□□ 0.84
UBL4AP11441 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.32■□□□□ 0.84
UBL4AP11441 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.32■□□□□ 0.84
UBL4AP11441 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.32■□□□□ 0.84
UBL4AP11441 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.32■□□□□ 0.84
UBL4AP11441 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBL4AP11441 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
UBL4AP11441 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.32■□□□□ 0.84
UBL4AP11441 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
UBL4AP11441 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBL4AP11441 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBL4AP11441 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.31■□□□□ 0.84
UBL4AP11441 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.31■□□□□ 0.84
UBL4AP11441 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBL4AP11441 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBL4AP11441 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBL4AP11441 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.31■□□□□ 0.84
UBL4AP11441 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
UBL4AP11441 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
UBL4AP11441 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
UBL4AP11441 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
UBL4AP11441 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.31■□□□□ 0.84
UBL4AP11441 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBL4AP11441 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.3■□□□□ 0.84
UBL4AP11441 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBL4AP11441 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
UBL4AP11441 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.3■□□□□ 0.84
UBL4AP11441 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
UBL4AP11441 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.3■□□□□ 0.84
UBL4AP11441 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.3■□□□□ 0.84
UBL4AP11441 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBL4AP11441 C1orf229-201ENST00000623686 2258 ntBASIC20.3■□□□□ 0.84
UBL4AP11441 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBL4AP11441 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.3■□□□□ 0.84
UBL4AP11441 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBL4AP11441 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBL4AP11441 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
UBL4AP11441 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
UBL4AP11441 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
UBL4AP11441 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBL4AP11441 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.29■□□□□ 0.84
UBL4AP11441 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.29■□□□□ 0.84
UBL4AP11441 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBL4AP11441 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBL4AP11441 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
UBL4AP11441 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.29■□□□□ 0.84
UBL4AP11441 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.29■□□□□ 0.84
UBL4AP11441 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.29■□□□□ 0.84
UBL4AP11441 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
UBL4AP11441 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBL4AP11441 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBL4AP11441 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
UBL4AP11441 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBL4AP11441 AC131281.2-201ENST00000520478 145 ntBASIC20.28■□□□□ 0.84
UBL4AP11441 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBL4AP11441 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
UBL4AP11441 AC099791.2-201ENST00000605725 427 ntBASIC20.28■□□□□ 0.84
UBL4AP11441 AC131212.1-201ENST00000613771 668 ntBASIC20.28■□□□□ 0.84
UBL4AP11441 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
UBL4AP11441 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.28■□□□□ 0.84
UBL4AP11441 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
UBL4AP11441 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBL4AP11441 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.27■□□□□ 0.84
UBL4AP11441 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBL4AP11441 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
UBL4AP11441 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBL4AP11441 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBL4AP11441 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.27■□□□□ 0.84
UBL4AP11441 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
UBL4AP11441 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
UBL4AP11441 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
UBL4AP11441 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.27■□□□□ 0.84
UBL4AP11441 AC092171.4-201ENST00000609130 632 ntBASIC20.27■□□□□ 0.84
UBL4AP11441 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
UBL4AP11441 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.27■□□□□ 0.84
UBL4AP11441 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBL4AP11441 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
UBL4AP11441 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBL4AP11441 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
UBL4AP11441 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBL4AP11441 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBL4AP11441 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.26■□□□□ 0.83
UBL4AP11441 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBL4AP11441 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBL4AP11441 AC006455.2-201ENST00000429931 906 ntBASIC20.26■□□□□ 0.83
UBL4AP11441 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
UBL4AP11441 MIR4466-201ENST00000606121 54 ntBASIC20.26■□□□□ 0.83
UBL4AP11441 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBL4AP11441 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBL4AP11441 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBL4AP11441 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBL4AP11441 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBL4AP11441 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.26■□□□□ 0.83
UBL4AP11441 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBL4AP11441 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms