Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 YSH1YLR277C 2340 nt3.48□□□□□ -1.85
RPL40BP0CH09 MSS116YDR194C 1995 nt3.47□□□□□ -1.85
RPL40BP0CH09 PPZ1YML016C 2079 nt3.47□□□□□ -1.85
RPL40BP0CH09 OPI6YDL096C 327 nt3.47□□□□□ -1.85
RPL40BP0CH09 YER076CYER076C 909 nt3.47□□□□□ -1.85
RPL40BP0CH09 MTC3YGL226W 372 nt3.47□□□□□ -1.85
RPL40BP0CH09 YBR141W-AYBR141W-A 96 nt3.47□□□□□ -1.85
RPL40BP0CH09 AVT7YIL088C 1473 nt3.47□□□□□ -1.85
RPL40BP0CH09 GRS2YPR081C 1857 nt3.46□□□□□ -1.86
RPL40BP0CH09 YGR269WYGR269W 327 nt3.46□□□□□ -1.86
RPL40BP0CH09 BNA1YJR025C 534 nt3.46□□□□□ -1.86
RPL40BP0CH09 YLR012CYLR012C 300 nt3.46□□□□□ -1.86
RPL40BP0CH09 YMR130WYMR130W 909 nt3.46□□□□□ -1.86
RPL40BP0CH09 RPS19AYOL121C 435 nt3.46□□□□□ -1.86
RPL40BP0CH09 HOS3YPL116W 2094 nt3.46□□□□□ -1.86
RPL40BP0CH09 FMP25YLR077W 1752 nt3.46□□□□□ -1.86
RPL40BP0CH09 GAC1YOR178C 2382 nt3.45□□□□□ -1.86
RPL40BP0CH09 TRM1YDR120C 1713 nt3.45□□□□□ -1.86
RPL40BP0CH09 HAT2YEL056W 1206 nt3.45□□□□□ -1.86
RPL40BP0CH09 YGL108CYGL108C 423 nt3.45□□□□□ -1.86
RPL40BP0CH09 YIL054WYIL054W 318 nt3.45□□□□□ -1.86
RPL40BP0CH09 SOP4YJL192C 705 nt3.45□□□□□ -1.86
RPL40BP0CH09 YNR061CYNR061C 660 nt3.45□□□□□ -1.86
RPL40BP0CH09 YBR056W-AYBR056W-A 201 nt3.45□□□□□ -1.86
RPL40BP0CH09 CKS1YBR135W 453 nt3.45□□□□□ -1.86
RPL40BP0CH09 FYV5YCL058C 459 nt3.45□□□□□ -1.86
RPL40BP0CH09 ORC6YHR118C 1308 nt3.44□□□□□ -1.86
RPL40BP0CH09 ZRC1YMR243C 1329 nt3.44□□□□□ -1.86
RPL40BP0CH09 ABP140YOR239W 1887 nt3.44□□□□□ -1.86
RPL40BP0CH09 TAF7YMR227C 1773 nt3.44□□□□□ -1.86
RPL40BP0CH09 ATP5YDR298C 639 nt3.44□□□□□ -1.86
RPL40BP0CH09 HIM1YDR317W 1245 nt3.44□□□□□ -1.86
RPL40BP0CH09 MTD1YKR080W 963 nt3.44□□□□□ -1.86
RPL40BP0CH09 YOL107WYOL107W 1029 nt3.44□□□□□ -1.86
RPL40BP0CH09 ZDS1YMR273C 2748 nt3.44□□□□□ -1.86
RPL40BP0CH09 OMS1YDR316W 1416 nt3.44□□□□□ -1.86
RPL40BP0CH09 IDS2YJL146W 1410 nt3.44□□□□□ -1.86
RPL40BP0CH09 CIT1YNR001C 1440 nt3.44□□□□□ -1.86
RPL40BP0CH09 LCB5YLR260W 2064 nt3.43□□□□□ -1.86
RPL40BP0CH09 RTK1YDL025C 1863 nt3.43□□□□□ -1.86
RPL40BP0CH09 SPT6YGR116W 4356 nt3.43□□□□□ -1.86
RPL40BP0CH09 RPP1AYDL081C 321 nt3.43□□□□□ -1.86
RPL40BP0CH09 RSM10YDR041W 612 nt3.43□□□□□ -1.86
RPL40BP0CH09 DIN7YDR263C 1293 nt3.43□□□□□ -1.86
RPL40BP0CH09 YER034WYER034W 558 nt3.43□□□□□ -1.86
RPL40BP0CH09 GLE2YER107C 1098 nt3.43□□□□□ -1.86
RPL40BP0CH09 LSM12YHR121W 564 nt3.43□□□□□ -1.86
RPL40BP0CH09 YMR316C-AYMR316C-A 312 nt3.43□□□□□ -1.86
RPL40BP0CH09 NIS1YNL078W 1224 nt3.43□□□□□ -1.86
RPL40BP0CH09 PNG1YPL096W 1092 nt3.43□□□□□ -1.86
RPL40BP0CH09 RSE1YML049C 4086 nt3.43□□□□□ -1.86
RPL40BP0CH09 PTR2YKR093W 1806 nt3.42□□□□□ -1.86
RPL40BP0CH09 MTC4YBR255W 2085 nt3.42□□□□□ -1.86
RPL40BP0CH09 HUL4YJR036C 2679 nt3.42□□□□□ -1.86
RPL40BP0CH09 PEA2YER149C 1263 nt3.42□□□□□ -1.86
RPL40BP0CH09 YGR161W-CYGR161W-C 279 nt3.42□□□□□ -1.86
RPL40BP0CH09 USB1YLR132C 873 nt3.42□□□□□ -1.86
RPL40BP0CH09 MDJ2YNL328C 441 nt3.42□□□□□ -1.86
RPL40BP0CH09 RAD17YOR368W 1206 nt3.42□□□□□ -1.86
RPL40BP0CH09 MDM30YLR368W 1797 nt3.41□□□□□ -1.86
RPL40BP0CH09 SPT10YJL127C 1923 nt3.41□□□□□ -1.86
RPL40BP0CH09 SKI6YGR195W 741 nt3.41□□□□□ -1.86
RPL40BP0CH09 RMA1YKL132C 1293 nt3.41□□□□□ -1.86
RPL40BP0CH09 IES3YLR052W 753 nt3.41□□□□□ -1.86
RPL40BP0CH09 ASC1YMR116C 960 nt3.41□□□□□ -1.86
RPL40BP0CH09 URA7YBL039C 1740 nt3.41□□□□□ -1.86
RPL40BP0CH09 HCA4YJL033W 2313 nt3.41□□□□□ -1.86
RPL40BP0CH09 NNK1YKL171W 2787 nt3.4□□□□□ -1.86
RPL40BP0CH09 NOG1YPL093W 1944 nt3.4□□□□□ -1.86
RPL40BP0CH09 RAD26YJR035W 3258 nt3.4□□□□□ -1.86
RPL40BP0CH09 ALG9YNL219C 1668 nt3.4□□□□□ -1.86
RPL40BP0CH09 CNL1YDR357C 369 nt3.4□□□□□ -1.87
RPL40BP0CH09 REC104YHR157W 549 nt3.4□□□□□ -1.87
RPL40BP0CH09 RPS1BYML063W 768 nt3.4□□□□□ -1.87
RPL40BP0CH09 PHA2YNL316C 1005 nt3.4□□□□□ -1.87
RPL40BP0CH09 FPK1YNR047W 2682 nt3.4□□□□□ -1.87
RPL40BP0CH09 BBC1YJL020C 3474 nt3.4□□□□□ -1.87
RPL40BP0CH09 PCL8YPL219W 1479 nt3.4□□□□□ -1.87
RPL40BP0CH09 PRT1YOR361C 2292 nt3.4□□□□□ -1.87
RPL40BP0CH09 SBE2YDR351W 2595 nt3.39□□□□□ -1.87
RPL40BP0CH09 ELM1YKL048C 1923 nt3.39□□□□□ -1.87
RPL40BP0CH09 MAG1YER142C 891 nt3.39□□□□□ -1.87
RPL40BP0CH09 ECM1YAL059W 639 nt3.39□□□□□ -1.87
RPL40BP0CH09 YMR122W-AYMR122W-A 255 nt3.39□□□□□ -1.87
RPL40BP0CH09 ECM16YMR128W 3804 nt3.39□□□□□ -1.87
RPL40BP0CH09 NRK1YNL129W 723 nt3.39□□□□□ -1.87
RPL40BP0CH09 YOR022CYOR022C 2148 nt3.39□□□□□ -1.87
RPL40BP0CH09 NAT5YOR253W 531 nt3.39□□□□□ -1.87
RPL40BP0CH09 RFM1YOR279C 933 nt3.39□□□□□ -1.87
RPL40BP0CH09 SMA1YPL027W 738 nt3.39□□□□□ -1.87
RPL40BP0CH09 MCM7YBR202W 2538 nt3.38□□□□□ -1.87
RPL40BP0CH09 IOC2YLR095C 2439 nt3.38□□□□□ -1.87
RPL40BP0CH09 YDR526CYDR526C 471 nt3.38□□□□□ -1.87
RPL40BP0CH09 ACT1YFL039C 1128 nt3.38□□□□□ -1.87
RPL40BP0CH09 RPS12YOR369C 432 nt3.38□□□□□ -1.87
RPL40BP0CH09 GCN5YGR252W 1320 nt3.38□□□□□ -1.87
RPL40BP0CH09 HOM3YER052C 1584 nt3.38□□□□□ -1.87
RPL40BP0CH09 TCO89YPL180W 2400 nt3.37□□□□□ -1.87
RPL40BP0CH09 RPS13YDR064W 456 nt3.37□□□□□ -1.87
RPL40BP0CH09 PEX7YDR142C 1128 nt3.37□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 10.7 ms