Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 AL031602.1-201ENST00000633169 911 ntBASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RAB40ALP0C0E4 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RAB40ALP0C0E4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB40ALP0C0E4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
RAB40ALP0C0E4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.8■□□□□ 0.92
RAB40ALP0C0E4 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB40ALP0C0E4 MIR6084-201ENST00000622012 110 ntBASIC20.8■□□□□ 0.92
RAB40ALP0C0E4 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RAB40ALP0C0E4 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB40ALP0C0E4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RAB40ALP0C0E4 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 DUX4L2-201ENST00000561772 1275 ntBASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 DUX4L6-201ENST00000626483 1275 ntBASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 DUX4L1-201ENST00000627662 1275 ntBASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 DUX4L8-201ENST00000629013 1275 ntBASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 DUX4L3-201ENST00000630187 1275 ntBASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 DUX4L7-201ENST00000630678 1275 ntBASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 DUX4L5-201ENST00000630834 1275 ntBASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RAB40ALP0C0E4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40ALP0C0E4 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40ALP0C0E4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40ALP0C0E4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40ALP0C0E4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.78■□□□□ 0.92
RAB40ALP0C0E4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.78■□□□□ 0.92
RAB40ALP0C0E4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.78■□□□□ 0.92
RAB40ALP0C0E4 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40ALP0C0E4 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40ALP0C0E4 LINC01124-201ENST00000409786 2117 ntBASIC20.78■□□□□ 0.92
RAB40ALP0C0E4 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40ALP0C0E4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RAB40ALP0C0E4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RAB40ALP0C0E4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
RAB40ALP0C0E4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
RAB40ALP0C0E4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB40ALP0C0E4 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB40ALP0C0E4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB40ALP0C0E4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB40ALP0C0E4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB40ALP0C0E4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.92
RAB40ALP0C0E4 KRT18P5-201ENST00000436075 1291 ntBASIC20.77■□□□□ 0.92
RAB40ALP0C0E4 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.77■□□□□ 0.92
RAB40ALP0C0E4 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RAB40ALP0C0E4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RAB40ALP0C0E4 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB40ALP0C0E4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.77■□□□□ 0.91
RAB40ALP0C0E4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.77■□□□□ 0.91
RAB40ALP0C0E4 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RAB40ALP0C0E4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RAB40ALP0C0E4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.76■□□□□ 0.91
RAB40ALP0C0E4 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB40ALP0C0E4 LINC02228-203ENST00000641970 1355 ntBASIC20.76■□□□□ 0.91
RAB40ALP0C0E4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
RAB40ALP0C0E4 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB40ALP0C0E4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB40ALP0C0E4 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RAB40ALP0C0E4 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RAB40ALP0C0E4 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.76■□□□□ 0.91
RAB40ALP0C0E4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB40ALP0C0E4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
RAB40ALP0C0E4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB40ALP0C0E4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.75■□□□□ 0.91
RAB40ALP0C0E4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.75■□□□□ 0.91
RAB40ALP0C0E4 CCDC92B-201ENST00000575506 885 ntBASIC20.75■□□□□ 0.91
RAB40ALP0C0E4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB40ALP0C0E4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.75■□□□□ 0.91
RAB40ALP0C0E4 AC068587.7-201ENST00000641602 218 ntBASIC20.75■□□□□ 0.91
RAB40ALP0C0E4 AC105233.4-201ENST00000642045 216 ntBASIC20.75■□□□□ 0.91
RAB40ALP0C0E4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RAB40ALP0C0E4 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.75■□□□□ 0.91
RAB40ALP0C0E4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RAB40ALP0C0E4 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.75■□□□□ 0.91
RAB40ALP0C0E4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms