Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETP07949 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETP07949 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RETP07949 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.29■■□□□ 1.16
RETP07949 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
RETP07949 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC22.28■■□□□ 1.16
RETP07949 AC006970.2-201ENST00000450065 779 ntBASIC22.28■■□□□ 1.16
RETP07949 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.28■■□□□ 1.16
RETP07949 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.28■■□□□ 1.16
RETP07949 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.28■■□□□ 1.16
RETP07949 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RETP07949 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
RETP07949 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
RETP07949 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETP07949 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETP07949 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETP07949 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETP07949 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
RETP07949 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETP07949 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.27■■□□□ 1.16
RETP07949 GALNS-213ENST00000569433 723 ntTSL 3 BASIC22.27■■□□□ 1.16
RETP07949 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.27■■□□□ 1.16
RETP07949 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.27■■□□□ 1.16
RETP07949 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETP07949 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RETP07949 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETP07949 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETP07949 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RETP07949 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.26■■□□□ 1.15
RETP07949 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.26■■□□□ 1.15
RETP07949 AC066615.1-201ENST00000640911 628 ntBASIC22.26■■□□□ 1.15
RETP07949 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.26■■□□□ 1.15
RETP07949 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RETP07949 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RETP07949 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RETP07949 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RETP07949 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RETP07949 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RETP07949 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RETP07949 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RETP07949 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.25■■□□□ 1.15
RETP07949 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.25■■□□□ 1.15
RETP07949 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.25■■□□□ 1.15
RETP07949 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RETP07949 BID-214ENST00000617586 542 ntTSL 5 BASIC22.25■■□□□ 1.15
RETP07949 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RETP07949 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.25■■□□□ 1.15
RETP07949 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RETP07949 AC133637.1-201ENST00000624115 1537 ntBASIC22.25■■□□□ 1.15
RETP07949 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.25■■□□□ 1.15
RETP07949 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC22.25■■□□□ 1.15
RETP07949 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RETP07949 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
RETP07949 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RETP07949 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RETP07949 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RETP07949 AC012676.1-201ENST00000574705 1949 ntBASIC22.24■■□□□ 1.15
RETP07949 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RETP07949 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC22.24■■□□□ 1.15
RETP07949 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RETP07949 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.24■■□□□ 1.15
RETP07949 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.24■■□□□ 1.15
RETP07949 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RETP07949 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RETP07949 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RETP07949 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RETP07949 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.23■■□□□ 1.15
RETP07949 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC22.23■■□□□ 1.15
RETP07949 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RETP07949 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.23■■□□□ 1.15
RETP07949 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.23■■□□□ 1.15
RETP07949 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.23■■□□□ 1.15
RETP07949 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC22.23■■□□□ 1.15
RETP07949 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.23■■□□□ 1.15
RETP07949 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC22.23■■□□□ 1.15
RETP07949 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RETP07949 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RETP07949 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.23■■□□□ 1.15
RETP07949 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
RETP07949 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RETP07949 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RETP07949 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
RETP07949 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RETP07949 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
RETP07949 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.22■■□□□ 1.15
RETP07949 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RETP07949 AP005435.1-201ENST00000529293 1178 ntBASIC22.22■■□□□ 1.15
RETP07949 KRT18P61-201ENST00000585825 1298 ntBASIC22.22■■□□□ 1.15
RETP07949 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC22.22■■□□□ 1.15
RETP07949 AC105233.4-201ENST00000642045 216 ntBASIC22.22■■□□□ 1.15
RETP07949 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
RETP07949 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.22■■□□□ 1.15
RETP07949 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
RETP07949 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RETP07949 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
RETP07949 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RETP07949 NCF1B-203ENST00000435988 1254 ntBASIC22.21■■□□□ 1.15
RETP07949 CROCCP5-201ENST00000436658 830 ntBASIC22.21■■□□□ 1.15
RETP07949 CD99P1-205ENST00000527459 561 ntBASIC22.21■■□□□ 1.15
RETP07949 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms