Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC29.56■■■□□ 2.32
COL5A2P05997 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC29.56■■■□□ 2.32
COL5A2P05997 GAMT-205ENST00000640762 751 ntTSL 5 BASIC29.56■■■□□ 2.32
COL5A2P05997 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
COL5A2P05997 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
COL5A2P05997 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
COL5A2P05997 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC29.55■■■□□ 2.32
COL5A2P05997 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
COL5A2P05997 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC29.55■■■□□ 2.32
COL5A2P05997 WT1-AS_3.1-201ENST00000613262 234 ntBASIC29.55■■■□□ 2.32
COL5A2P05997 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL5A2P05997 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL5A2P05997 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL5A2P05997 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC29.55■■■□□ 2.32
COL5A2P05997 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
COL5A2P05997 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
COL5A2P05997 AC011767.1-201ENST00000617410 1153 ntBASIC29.55■■■□□ 2.32
COL5A2P05997 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC29.55■■■□□ 2.32
COL5A2P05997 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
COL5A2P05997 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
COL5A2P05997 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
COL5A2P05997 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
COL5A2P05997 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
COL5A2P05997 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
COL5A2P05997 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC29.54■■■□□ 2.32
COL5A2P05997 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
COL5A2P05997 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
COL5A2P05997 AL050303.2-201ENST00000619798 666 ntBASIC29.54■■■□□ 2.32
COL5A2P05997 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC29.53■■■□□ 2.32
COL5A2P05997 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC29.53■■■□□ 2.32
COL5A2P05997 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
COL5A2P05997 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
COL5A2P05997 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
COL5A2P05997 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
COL5A2P05997 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC29.52■■■□□ 2.32
COL5A2P05997 AC142086.2-201ENST00000569753 217 ntBASIC29.52■■■□□ 2.32
COL5A2P05997 MFSD11-216ENST00000590393 1141 ntBASIC29.52■■■□□ 2.32
COL5A2P05997 SMUG1P1-201ENST00000590640 811 ntBASIC29.52■■■□□ 2.32
COL5A2P05997 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
COL5A2P05997 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
COL5A2P05997 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
COL5A2P05997 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
COL5A2P05997 KRT18P11-201ENST00000435214 1283 ntBASIC29.51■■■□□ 2.31
COL5A2P05997 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC29.51■■■□□ 2.31
COL5A2P05997 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC29.51■■■□□ 2.31
COL5A2P05997 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC29.51■■■□□ 2.31
COL5A2P05997 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
COL5A2P05997 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC29.51■■■□□ 2.31
COL5A2P05997 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
COL5A2P05997 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC29.5■■■□□ 2.31
COL5A2P05997 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
COL5A2P05997 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC29.5■■■□□ 2.31
COL5A2P05997 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC29.5■■■□□ 2.31
COL5A2P05997 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
COL5A2P05997 SPI1-203ENST00000533030 661 ntTSL 2 BASIC29.49■■■□□ 2.31
COL5A2P05997 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
COL5A2P05997 AP003733.4-201ENST00000623785 1697 ntBASIC29.49■■■□□ 2.31
COL5A2P05997 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC29.49■■■□□ 2.31
COL5A2P05997 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC29.49■■■□□ 2.31
COL5A2P05997 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC29.48■■■□□ 2.31
COL5A2P05997 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
COL5A2P05997 APTR-205ENST00000447009 902 ntTSL 2 BASIC29.48■■■□□ 2.31
COL5A2P05997 CPT2-209ENST00000636935 803 ntTSL 5 BASIC29.48■■■□□ 2.31
COL5A2P05997 TMEM191A-211ENST00000637163 1067 ntBASIC29.48■■■□□ 2.31
COL5A2P05997 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
COL5A2P05997 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
COL5A2P05997 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
COL5A2P05997 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC29.48■■■□□ 2.31
COL5A2P05997 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC29.48■■■□□ 2.31
COL5A2P05997 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC29.48■■■□□ 2.31
COL5A2P05997 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC29.48■■■□□ 2.31
COL5A2P05997 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
COL5A2P05997 GPX1P1-201ENST00000388829 606 ntBASIC29.48■■■□□ 2.31
COL5A2P05997 GUSBP6-202ENST00000438529 1198 ntBASIC29.48■■■□□ 2.31
COL5A2P05997 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC29.48■■■□□ 2.31
COL5A2P05997 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC29.48■■■□□ 2.31
COL5A2P05997 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC29.48■■■□□ 2.31
COL5A2P05997 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC29.48■■■□□ 2.31
COL5A2P05997 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
COL5A2P05997 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
COL5A2P05997 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC29.47■■■□□ 2.31
COL5A2P05997 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
COL5A2P05997 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
COL5A2P05997 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
COL5A2P05997 CD99P1-205ENST00000527459 561 ntBASIC29.47■■■□□ 2.31
COL5A2P05997 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC29.47■■■□□ 2.31
COL5A2P05997 AC022211.4-201ENST00000625094 2161 ntBASIC29.47■■■□□ 2.31
COL5A2P05997 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
COL5A2P05997 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
COL5A2P05997 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
COL5A2P05997 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC29.46■■■□□ 2.31
COL5A2P05997 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
COL5A2P05997 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
COL5A2P05997 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC29.46■■■□□ 2.31
COL5A2P05997 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC29.46■■■□□ 2.31
COL5A2P05997 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC29.46■■■□□ 2.31
COL5A2P05997 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
COL5A2P05997 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
COL5A2P05997 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC29.45■■■□□ 2.31
COL5A2P05997 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms