Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD74P04233 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD74P04233 GPX1-201ENST00000419349 1106 ntBASIC18.55■□□□□ 0.56
CD74P04233 AL592293.1-201ENST00000502889 1188 ntBASIC18.55■□□□□ 0.56
CD74P04233 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD74P04233 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.55■□□□□ 0.56
CD74P04233 AC144652.1-201ENST00000609974 1624 ntBASIC18.55■□□□□ 0.56
CD74P04233 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CD74P04233 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD74P04233 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD74P04233 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.55■□□□□ 0.56
CD74P04233 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CD74P04233 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD74P04233 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.54■□□□□ 0.56
CD74P04233 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CD74P04233 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.54■□□□□ 0.56
CD74P04233 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.54■□□□□ 0.56
CD74P04233 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD74P04233 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.54■□□□□ 0.56
CD74P04233 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.54■□□□□ 0.56
CD74P04233 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD74P04233 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CD74P04233 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD74P04233 AC244015.2-201ENST00000616358 1861 ntBASIC18.54■□□□□ 0.56
CD74P04233 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CD74P04233 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD74P04233 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD74P04233 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CD74P04233 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD74P04233 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CD74P04233 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.53■□□□□ 0.56
CD74P04233 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.53■□□□□ 0.56
CD74P04233 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD74P04233 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CD74P04233 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD74P04233 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD74P04233 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD74P04233 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD74P04233 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD74P04233 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD74P04233 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CD74P04233 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC18.53■□□□□ 0.56
CD74P04233 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CD74P04233 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.52■□□□□ 0.56
CD74P04233 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CD74P04233 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CD74P04233 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.52■□□□□ 0.56
CD74P04233 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CD74P04233 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD74P04233 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CD74P04233 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CD74P04233 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
CD74P04233 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.51■□□□□ 0.55
CD74P04233 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD74P04233 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD74P04233 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.51■□□□□ 0.55
CD74P04233 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CD74P04233 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.51■□□□□ 0.55
CD74P04233 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CD74P04233 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD74P04233 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD74P04233 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD74P04233 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CD74P04233 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.5■□□□□ 0.55
CD74P04233 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD74P04233 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.5■□□□□ 0.55
CD74P04233 AC004448.1-201ENST00000458332 883 ntBASIC18.5■□□□□ 0.55
CD74P04233 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD74P04233 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD74P04233 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CD74P04233 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.5■□□□□ 0.55
CD74P04233 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD74P04233 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD74P04233 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CD74P04233 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CD74P04233 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CD74P04233 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD74P04233 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.49■□□□□ 0.55
CD74P04233 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.49■□□□□ 0.55
CD74P04233 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.49■□□□□ 0.55
CD74P04233 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD74P04233 DUX4L9-201ENST00000449051 1259 ntBASIC18.49■□□□□ 0.55
CD74P04233 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.49■□□□□ 0.55
CD74P04233 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.49■□□□□ 0.55
CD74P04233 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CD74P04233 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.49■□□□□ 0.55
CD74P04233 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CD74P04233 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.49■□□□□ 0.55
CD74P04233 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD74P04233 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
CD74P04233 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC18.49■□□□□ 0.55
CD74P04233 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CD74P04233 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CD74P04233 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.48■□□□□ 0.55
CD74P04233 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.48■□□□□ 0.55
CD74P04233 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CD74P04233 AC022616.5-201ENST00000518796 181 ntBASIC18.48■□□□□ 0.55
CD74P04233 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.48■□□□□ 0.55
CD74P04233 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.48■□□□□ 0.55
CD74P04233 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 446.6 ms